RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MSI2Q96DH6 328 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 C1orf159Q96HA4 380 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 DCLRE1CQ96SD1 692 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ATF6BQ99941 703 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 SLC19A3Q9BZV2 496 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 RERGLQ9H628 205 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ISG20L2Q9H9L3 353 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ADGRL4Q9HBW9 690 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 KLHL9Q9P2J3 617 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 CHRNA9Q9UGM1 479 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ADAM30Q9UKF2 790 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 POU2F3Q9UKI9 436 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 PAIP2BQ9ULR5 123 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 A0A087WUJ7 227 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ZC3H12DA2A288 527 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 H7C417 338 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 CSTAP01040 98 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 HLA-DQB1P01920 261 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 TPTEP56180 551 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 GGTLC2Q14390 218 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 LCN1P1Q5VSP4 162 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 FAM71CQ8NEG0 241 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 NOX1Q9Y5S8 564 aa11.06□□□□□ -0.64
CHRNA1-205ENST00000409542 ARFGEF3Q5TH69 2177 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 SHISA3A0PJX4 238 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 GJE1A6NN92 205 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 ZNF724A8MTY0 619 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 M0R1B8 84 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 PLPP2O43688 288 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 OR7A10O76100 309 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 CSF3P09919 207 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 AZGP1P25311 298 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 NOS3P29474 1203 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 LCN1P31025 176 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 RPS5P46782 204 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 RFX2P48378 723 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 EFNA4P52798 201 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 ZNF85Q03923 595 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 SLC25A53Q5H9E4 307 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 TMEM108Q6UXF1 575 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 NRARPQ7Z6K4 114 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 ZNF100Q8IYN0 542 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 CADM2Q8N3J6 435 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 CELF2-AS1Q8N7Q2 184 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 POMGNT2Q8NAT1 580 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 OR5W2Q8NH69 310 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 RADILQ96JH8 1075 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 MRGPRX4Q96LA9 322 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 OR5B2Q96R09 309 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 OR51V1Q9H2C8 321 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 PPP1R3EQ9H7J1 279 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 EXOSC3Q9NQT5 275 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 KCNS2Q9ULS6 477 aa11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 SIRT4Q9Y6E7 314 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-205ENST00000409542 IGHV4-61A0A0C4DH41 118 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 LOC100289279A0A1B0GTE1 492 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 ARPC3O15145 178 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 IDH3BO43837 385 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 PTAFRP25105 342 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 EVX1P49640 407 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 GZMKP49863 264 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 OR2B6P58173 313 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 QPRTQ15274 297 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 MST1LQ2TV78 715 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 PYDC2Q56P42 97 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 ZNF544Q6NX49 715 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 CNIH2Q6PI25 160 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 SYS1Q8N2H4 156 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 WDR31Q8NA23 367 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 ZNF527Q8NB42 609 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 C3orf49Q96BT1 292 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 DNAJA3Q96EY1 480 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 GPX7Q96SL4 187 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 TBX5Q99593 518 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 COMMD3Q9UBI1 195 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 ATP23Q9Y6H3 246 aa11.04□□□□□ -0.64
CHRNA1-205ENST00000409542 TENM1Q9UKZ4 2725 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 CIB4A0PJX0 185 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 CD1AP06126 327 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 ITGA5P08648 1049 aa11.03□□□□□ -0.64
CHRNA1-205ENST00000409542 PNMTP11086 282 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms