RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SNX5Q9Y5X3 404 aa14.33□□□□□ -0.12
TSPAN4-208ENST00000409531 IGHV1-18A0A0C4DH31 117 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 TMEM129A0AVI4 362 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 METTL15A6NJ78 407 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 CECR9P0C854 216 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 LIMS3P0CW19 117 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 LIMS4P0CW20 117 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 PTAFRP25105 342 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 DCTDP32321 178 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 ETV1P50549 477 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 TPTEP56180 551 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 ARL9Q6T311 187 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 SEZ6L2Q6UXD5 910 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 SPATC1Q76KD6 591 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 SVOPQ8N4V2 548 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 YIPF7Q8N8F6 280 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 OR52N1Q8NH53 320 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 POM121L2Q96KW2 1035 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 SIGLEC11Q96RL6 698 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 MND1Q9BWT6 205 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 TTTY10Q9BZA0 68 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 ESRP2Q9H6T0 727 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 ELOVL3Q9HB03 270 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 SLCO1C1Q9NYB5 712 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 NPAP1Q9NZP6 1156 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 LRP12Q9Y561 859 aa14.32□□□□□ -0.12
TSPAN4-208ENST00000409531 AKAP6Q13023 2319 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 C5orf49A4QMS7 147 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 TRIM64A6NGJ6 449 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 DEFB108AA8MXU0 73 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 CRYAAP02489 173 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 MT-ND5P03915 603 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 OTX1P32242 354 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 GALK2Q01415 458 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 MVKQ03426 396 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 MRPL28Q13084 256 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF829Q3KNS6 432 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 BEX5Q5H9J7 111 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF684Q5T5D7 378 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 UNQ6126/PRO20091Q6UXV3 157 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 CDH24Q86UP0 819 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 SGCDQ92629 289 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF649Q9BS31 505 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF696Q9H7X3 374 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 SP140LQ9H930 580 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 GNG8Q9UK08 70 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 EDARQ9UNE0 448 aa14.31□□□□□ -0.12
TSPAN4-208ENST00000409531 LOC100509620A0A075B734 347 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 F5H5K5 113 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 J3QLW9 94 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 M0R135 149 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 PSMD9O00233 223 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 MT-ND2P03891 347 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CELA3BP08861 270 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF19P17023 458 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CCNOP22674 350 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CD40P25942 277 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 RGS6P49758 472 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 NR1H2P55055 460 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 TP53I3Q53FA7 332 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF544Q6NX49 715 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF773Q6PK81 442 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 DRAM2Q6UX65 266 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF283Q8N7M2 679 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 NANOGP1Q8N7R0 232 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 NRGNQ92686 78 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 ZNF799Q96GE5 643 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 C4orf36Q96KX1 117 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 PLEKHF2Q9H8W4 249 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 EIF3KQ9UBQ5 218 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CLEC2DQ9UHP7 191 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 MRM2Q9UI43 246 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CADP27708 2225 aa14.3□□□□□ -0.12
TSPAN4-208ENST00000409531 CSMD2Q7Z408 3487 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 CCDC168Q8NDH2 2452 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 A0A087WXM4 84 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 PRR32B1ATL7 298 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 J3QW42 95 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 SIAH2O43255 324 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 ABHD16AO95870 558 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 HTR1AP08908 422 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 ADRA2AP08913 450 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 SLC6A9P48067 706 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 CX3CR1P49238 355 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 PRKXP51817 358 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 GBX2P52951 348 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 WNT4P56705 351 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 OR12D2P58182 307 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 PSMA6P60900 246 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 NAAAQ02083 359 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 IRF3Q14653 427 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 TBCEQ15813 527 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 KRTAP27-1Q3LI81 207 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 LIPNQ5VXI9 398 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 MYPOPQ86VE0 399 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 SLC7A6Q92536 515 aa14.29□□□□□ -0.12
TSPAN4-208ENST00000409531 PIK3IP1Q96FE7 263 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms