RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 OR52A1Q9UKL2 312 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 TMEM269A0A1B0GVZ9 245 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 LINC01387J3KSC0 135 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 ALDOBP05062 364 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 KLK3P07288 261 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 RAB40ALP0C0E4 278 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 SPOCK1Q08629 439 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 DYRK1AQ13627 763 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 FAM166AQ6J272 317 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 UEVLDQ8IX04 471 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 FCAMRQ8WWV6 532 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 RAB40AQ8WXH6 277 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC25A44Q96H78 314 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 ZC3H10Q96K80 434 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 OR51J1Q9H342 316 aa13.5□□□□□ -0.25
SCAMP4-202ENST00000409472 A8MXK9 166 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 DNASE1P24855 282 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SSTR2P30874 369 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 VEGFCP49767 419 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 MC2RQ01718 297 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 C2orf76Q3KRA6 126 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 NOXO1Q8NFA2 376 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 OR13C3Q8NGS6 347 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 FAM3DQ96BQ1 224 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 INTS12Q96CB8 462 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SLAMF6Q96DU3 332 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 OR10A4Q9H209 315 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 NXT1Q9UKK6 140 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 LHFPL6Q9Y693 200 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 NCKAP5O14513 1909 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 IGHV3-15A0A0B4J1V0 119 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 A0A0G2JMM0 328 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 TMEM272A0A1B0GTI8 110 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 A0A1W2PPB8 328 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 A0A1W2PRS3 328 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 ANKRD20A5PA0PJZ0 165 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 KIR3DP1A8MWS1 328 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 IGFBP3P17936 291 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SIGLEC14Q08ET2 396 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 RAB11BQ15907 218 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 OR10K2Q6IF99 312 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC23A3Q6PIS1 610 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 BTN2A1Q7KYR7 527 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 LILRB2Q8N423 598 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 OR4D10Q8NGI6 311 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC25A28Q96A46 364 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 JSRP1Q96MG2 331 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SOX7Q9BT81 388 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 MS4A7Q9GZW8 240 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 ZNF700Q9H0M5 742 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 CDCP1Q9H5V8 836 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 SEC61A2Q9H9S3 476 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 CYB5R1Q9UHQ9 305 aa13.49□□□□□ -0.25
SCAMP4-202ENST00000409472 GGT3PA6NGU5 568 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC17A2O00624 439 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 CLRN1P58418 232 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 GLYATL3Q5SZD4 288 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC22A10Q63ZE4 541 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 OR2Y1Q8NGV0 311 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 FAM206AQ9NX38 181 aa13.48□□□□□ -0.25
SCAMP4-202ENST00000409472 C9J4A7 227 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 AQP8O94778 261 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 CFDP00746 253 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 TTRP02766 147 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 SLC2A1P11166 492 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 ZP1P60852 638 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 SCP2D1Q9UJQ7 156 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 HHLA2Q9UM44 414 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 ARPC1BO15143 372 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 XRCC3O43542 346 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 CFPP27918 469 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 MEOX2P50222 304 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 NHLRC3Q5JS37 347 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 Q6ZTK2 550 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 RNF144BQ7Z419 303 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 C7orf50Q9BRJ6 194 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 AHCTF1Q8WYP5 2266 aa13.47□□□□□ -0.25
SCAMP4-202ENST00000409472 TRAV18A0A075B6X5 111 aa13.46□□□□□ -0.25
SCAMP4-202ENST00000409472 ACOT7O00154 380 aa13.46□□□□□ -0.25
SCAMP4-202ENST00000409472 TP53I11O14683 189 aa13.46□□□□□ -0.25
SCAMP4-202ENST00000409472 SNAPC5O75971 98 aa13.46□□□□□ -0.25
SCAMP4-202ENST00000409472 HRGP04196 525 aa13.46□□□□□ -0.25
SCAMP4-202ENST00000409472 LAP3P28838 519 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms