RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZIK1Q3SY52 487 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 DNM1P46Q6ZS02 220 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 RHOUQ7L0Q8 258 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 MEPCEQ7L2J0 689 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 BCDIN3DQ7Z5W3 292 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 OTOSQ8NHW6 89 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 RNF133Q8WVZ7 376 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 TOR3AQ9H497 397 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 CENPMQ9NSP4 180 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ZNF878C9JN71 531 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 E9PQ18 207 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 M0R135 149 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 NAA10P41227 235 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 TAF13Q15543 124 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 SLC16A9Q7RTY1 509 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 GID4Q8IVV7 300 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 TRUB1Q8WWH5 349 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 NEU4Q8WWR8 484 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 ZNF799Q96GE5 643 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 TMUB1Q9BVT8 246 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 POFUT1Q9H488 388 aa16.98■□□□□ 0.31
PDLIM2-207ENST00000409417 ZNF469Q96JG9 3925 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 SLC22A31A6NKX4 558 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 LY6HO94772 140 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 MT-ND5P03915 603 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 NAT2P11245 290 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 DSCR9P59020 149 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 PSG7Q13046 419 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 TMEM255AQ5JRV8 349 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 FBXW12Q6X9E4 464 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 SNX33Q8WV41 574 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 MBOAT4Q96T53 435 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 KCNJ15Q99712 375 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 YIPF3Q9GZM5 350 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 IMPAD1Q9NX62 359 aa16.97■□□□□ 0.31
PDLIM2-207ENST00000409417 TRIM64A6NGJ6 449 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 TRIM64BA6NI03 449 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 LCATP04180 440 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 LYNP07948 512 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 CD99P14209 185 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 RAC2P15153 192 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 OPRL1P41146 370 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 SLC6A9P48067 706 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 GRB2P62993 217 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 GGTLC2Q14390 218 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 ALKBH6Q3KRA9 238 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 CLEC2AQ6UVW9 174 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 DRAM2Q6UX65 266 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 SPATC1Q76KD6 591 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 NAA40Q86UY6 237 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 ZNF525Q8N782 197 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 FAM81AQ8TBF8 368 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 HAVCR1Q96D42 359 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 CMBLQ96DG6 245 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 AMELYQ99218 206 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 TPK1Q9H3S4 243 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 CYSLTR2Q9NS75 346 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 HAO2Q9NYQ3 351 aa16.96■□□□□ 0.31
PDLIM2-207ENST00000409417 MED13LQ71F56 2210 aa16.96■□□□□ 0.3
PDLIM2-207ENST00000409417 PLSCR5A0PG75 271 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 C17orf100A8MU93 164 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 CSF3P09919 207 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 ALOX5APP20292 161 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 KITLGP21583 273 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 LIPAP38571 399 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 MMP15P51511 669 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 TNK1Q13470 666 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 TRIP10Q15642 601 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 THEM6Q8WUY1 208 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 CNN2Q99439 309 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 MYOZ1Q9NP98 299 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 C8orf4Q9NR00 106 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 DLL4Q9NR61 685 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 CGGBP1Q9UFW8 167 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 LAMP5Q9UJQ1 280 aa16.95■□□□□ 0.3
PDLIM2-207ENST00000409417 MRPL3P09001 348 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 PRKXP51817 358 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 SNRPGP62308 76 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 HLXQ14774 488 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 PCGF3Q3KNV8 242 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 SLC25A30Q5SVS4 291 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 ZNF582Q96NG8 517 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 RDH12Q96NR8 316 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 RHNO1Q9BSD3 238 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 PTTG3PQ9NZH4 202 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 WARS2Q9UGM6 360 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 PURGQ9UJV8 347 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 KLHDC2Q9Y2U9 406 aa16.94■□□□□ 0.3
PDLIM2-207ENST00000409417 TIMM8AO60220 97 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 APOC1P02654 83 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 DAOP14920 347 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 FOSL1P15407 271 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 HTR1FP30939 366 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 ZNF81P51508 661 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 HCCSP53701 268 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 MALLQ13021 153 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 LRRC36Q1X8D7 754 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 ZMAT1Q5H9K5 638 aa16.93■□□□□ 0.3
PDLIM2-207ENST00000409417 FAM168AQ92567 244 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms