RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ZFP62Q8NB50 900 aaPredicted RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 RXFP4Q8TDU9 374 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 ARHGDIGQ99819 225 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ZNF346Q9UL40 294 aaKnown RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 ZC3H12DA2A288 527 aaKnown RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 SLC17A2O00624 439 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 PHOX2AO14813 284 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 RRASP10301 218 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 LINC00303Q3SY05 128 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ZNF628Q5EBL2 1059 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ST8SIA1Q92185 356 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 FAM122AQ96E09 287 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 THAP10Q9P2Z0 257 aaPredicted RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 A0A1W2PPH5 198 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 CST4P01036 141 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 LIMS3P0CW19 117 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 LIMS4P0CW20 117 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ANKRD34AQ69YU3 496 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 SLC24A4Q8NFF2 622 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 ZNF296Q8WUU4 475 aaPredicted RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 HGDQ93099 445 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 PLA2G12AQ9BZM1 189 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 CTSFQ9UBX1 484 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 SLC23A1Q9UHI7 598 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 PNPP00491 289 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 SPANXN5Q5MJ07 72 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 OR2G2Q8NGZ5 317 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
RNF43-201ENST00000407977 LTB4R2Q9NPC1 389 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 HS3ST3A1Q9Y663 406 aa11.8□□□□□ -0.52
RNF43-201ENST00000407977 SIGLEC6O43699 453 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 APEHP13798 732 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 NTF3P20783 257 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 CSN1S1P47710 185 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 EXT1Q16394 746 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PRAMEF20Q5VT98 475 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 LILRA3Q8N6C8 439 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 OR51F2Q8NH61 342 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 H0Y8G0 127 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 SSSCA1O60232 199 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 SBK3P0C264 359 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PPICP45877 212 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 CDK5Q00535 292 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 NUDCD2Q8WVJ2 157 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 USB1Q9BQ65 265 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 FGF21Q9NSA1 209 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TMEFF2Q9UIK5 374 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 TIMM10BQ9Y5J6 103 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PRSS37A4D1T9 235 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 RAB27BO00194 218 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TMPRSS11DO60235 418 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TSPAN12O95859 305 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 RTN4IP1Q8WWV3 396 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 SIGLEC11Q96RL6 698 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TPPP3Q9BW30 176 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TXNIPQ9H3M7 391 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PRR35P0CG20 571 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PCBP4P57723 403 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 CLPPQ16740 277 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 ZDHHC11Q9H8X9 412 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 PDFQ9HBH1 243 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 OBP2AQ9NY56 170 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 TRBV5-4A0A0C4DH59 114 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 ANKRD61A6NGH8 418 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 DVL1O14640 695 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 ENSAO43768 121 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 CSF2RBP32927 897 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 TOMM34Q15785 309 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 FAAP20Q6NZ36 180 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 ZNF574Q6ZN55 896 aaPredicted RBP11.79□□□□□ -0.52
RNF43-201ENST00000407977 M1APQ8TC57 530 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 NTNG2Q96CW9 530 aa11.79□□□□□ -0.52
RNF43-201ENST00000407977 A0A1B0GX78 115 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 H3BNC9 293 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 ZNF749O43361 778 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 AKR7A3O95154 331 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 CER1O95813 267 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 WNT11O96014 354 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 IGLV3-25P01717 112 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 SLC2A1P11166 492 aa11.78□□□□□ -0.52
RNF43-201ENST00000407977 NQO2P16083 231 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms