RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 DCAF7P61962 342 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CLDN22Q8N7P3 220 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 OR8A1Q8NGG7 326 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 OR52N2Q8NGI0 321 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 POM121Q96HA1 1249 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC25A18Q9H1K4 315 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 IL20Q9NYY1 176 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SPATA31A5Q5VU36 1347 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SPATA31A3Q5VYP0 1347 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 NID1P14543 1247 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 TEAD1P28347 426 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ASCL1P50553 236 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CRYBB1P53674 252 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ORAI1Q96D31 301 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SYT17Q9BSW7 474 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 PGA4P0DJD7 388 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 PGA5P0DJD9 388 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 GABRB3P28472 473 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CCR9P51686 369 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 SH3BP2P78314 561 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 PMVKQ15126 192 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CDRT4Q8N9R6 151 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 RBMY1BA6NDE4 496 aaKnown RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 RBMY1EA6NEQ0 496 aaKnown RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 FAM74A7A6NL05 159 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 HSD17B6O14756 317 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 LYPLA2O95372 231 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 CTDNEP1O95476 244 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 RBMY1DP0C7P1 496 aaKnown RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF502Q8TBZ5 544 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF778Q96MU6 729 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF714Q96N38 554 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 MOKQ9UQ07 419 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 NPTNQ9Y639 398 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF468Q5VIY5 522 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 MYPOPQ86VE0 399 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 NAXDQ8IW45 347 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 HMCESQ96FZ2 354 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 TBX15Q96SF7 602 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 PARLQ9H300 379 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 HRASLS2Q9NWW9 162 aa7.9□□□□□ -1.14
CACNA1C-220ENST00000399655 STC1P52823 247 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM258P61165 79 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SQSTM1Q13501 440 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 BCL7AQ4VC05 210 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM128Q5BJH2 165 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 JMJD6Q6NYC1 403 aaPredicted RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 FAM57BQ71RH2 274 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 VKORC1L1Q8N0U8 176 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 GPR78Q96P69 363 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 PEF1Q9UBV8 284 aaKnown RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SPATA31A7Q8IWB4 1347 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 IL1R2P27930 398 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 GDNFP39905 211 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 ZG16BQ96DA0 208 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 TECRQ9NZ01 308 aaKnown RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 ZFP37Q9Y6Q3 630 aaPredicted RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 MED12LQ86YW9 2145 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 MYADML2A6NDP7 307 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SOWAHBA6NEL2 793 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 ITGB7P26010 798 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 PTGFRP43088 359 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 HERPUD1Q15011 391 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 OVCH2Q7RTZ1 564 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 OR5A1Q8NGJ0 315 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 ALOXE3Q9BYJ1 711 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SIX3O95343 332 aaPredicted RBP7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SFTPCP11686 197 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 ATF1P18846 271 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 OPRD1P41143 372 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 C10orf128Q5T292 105 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 WBP2Q969T9 261 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC35B3Q9H1N7 401 aa7.9□□□□□ -1.15
CACNA1C-220ENST00000399655 MAP1LC3B2A6NCE7 125 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM241Q24JQ0 296 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF766Q5HY98 468 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 MAP1LC3BQ9GZQ8 125 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 CTDSP2O14595 271 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 FCGR2AP12318 317 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 ZFP41Q8N8Y5 198 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 NEURL2Q9BR09 285 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 ANGPTL4Q9BY76 406 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 OARD1Q9Y530 152 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 GM2AP17900 193 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 C1orf185Q5T7R7 199 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM81Q6P7N7 255 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 LIPIQ6XZB0 460 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 SPRED1Q7Z699 444 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 TRMT2AQ8IZ69 625 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 RASL12Q9NYN1 266 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 FOXJ3Q9UPW0 622 aa7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 CNOT1A5YKK6 2376 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-220ENST00000399655 CNTNAP1P78357 1384 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms