RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 BANF2Q9H503 90 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MRPS28Q9Y2Q9 187 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CELSR3Q9NYQ7 3312 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PRSS37A4D1T9 235 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A6NIZ1 184 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GABARAPH6UMI1 98 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 HTR3BO95264 441 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PRH1P02810 166 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RAB3AP20336 220 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SLC6A9P48067 706 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RAP1BP61224 184 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RAP1AP62834 184 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ZBTB37Q5TC79 503 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PRAMEF20Q5VT98 475 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PAPD4Q6PIY7 484 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM185AQ8NFB2 350 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR5D18Q8NGL1 313 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MR1Q95460 341 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MIB2Q96AX9 1013 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TIMP4Q99727 224 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 S1PR5Q9H228 398 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FGF21Q9NSA1 209 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ASF1BQ9NVP2 202 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PITPNC1Q9UKF7 332 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 EMC9Q9Y3B6 208 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RHBDD3Q9Y3P4 386 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LOC100289279A0A1B0GTE1 492 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A8MVM7 634 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 B8ZZF3 427 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SIGLEC5O15389 551 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 UPK3AO75631 287 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RAD51DO75771 328 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GALP22466 123 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CLDN17P56750 224 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MRPS34P82930 218 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RPL19P84098 196 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 INSM1Q01101 510 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SIGLEC14Q08ET2 396 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GGTLC2Q14390 218 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 HLXQ14774 488 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LINC01590Q5TEZ4 76 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR52W1Q6IF63 320 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 IDO2Q6ZQW0 420 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GALNT16Q8N428 558 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ABHD5Q8WTS1 349 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PHYHIPQ92561 330 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PIGTQ969N2 578 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SCARF2Q96GP6 870 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 KLHL13Q9P2N7 655 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM184BQ9Y519 407 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A0A0A6YYH2 397 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A0A0B4J2A0 478 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A0A1B0GUH1 482 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 A6NJ64 397 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 H7C1Q1 480 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 HS3ST1O14792 307 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DCNP07585 359 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TAS2R19P59542 299 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DCAF7P61962 342 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RPS11P62280 158 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CLLU1Q5K131 121 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GLIPR1L1Q6UWM5 242 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MUC20Q8N307 709 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR1M1Q8NGA1 313 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR4S1Q8NGB4 309 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OTOSQ8NHW6 89 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CPNE2Q96FN4 548 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SLC2A8Q9NY64 477 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SHPKQ9UHJ6 478 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RARRES3Q9UL19 164 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM82A0PJX8 343 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM235A6NFC5 223 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM212A6NML5 194 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CTDSPLO15194 276 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CDAP32320 146 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DCAF12L2Q5VW00 463 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 UNQ9370/PRO34162Q6UXP9 181 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DCUN1D4Q92564 292 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LRFN5Q96NI6 719 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SORCS2Q96PQ0 1159 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 UBL7Q96S82 380 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SMIM3Q9BZL3 60 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF701Q9NV72 531 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 RAB22AQ9UL26 194 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TEX13DA0A0J9YY54 714 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 BLACEA4D250 179 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 MCRIP1C9JLW8 97 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 J3QRE1 110 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 SLC33A1O00400 549 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR2T1O43869 369 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 HLA-DOBP13765 273 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ALOX5APP20292 161 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 S100A11P31949 105 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 NUDT1P36639 197 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 C19orf57Q0VDD7 668 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 RBMS2Q15434 407 aaKnown RBP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 OR52N5Q8NH56 324 aa4.43□□□□□ -1.7
SMAD4-202ENST00000398417 RNF128Q8TEB7 428 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms