RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 OR6Q1Q8NGQ2 317 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 OR5W2Q8NH69 310 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 APH1BQ8WW43 257 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 RGP1Q92546 391 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 NAT6Q93015 286 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 RPEQ96AT9 228 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 ECHDC3Q96DC8 303 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 GPR21Q99679 349 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 FOXC2Q99958 501 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 ZNRD1Q9P1U0 126 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 MYEF2Q9P2K5 600 aaKnown RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 ZNF282Q9UDV7 671 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 MTFP1Q9UDX5 166 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 PSG11Q9UQ72 335 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 DENND4AQ7Z401 1863 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 A0A0J9YXV3 536 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 GABRR3A8MPY1 467 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 XRCC2O43543 280 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ENTPD5O75356 428 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 SEMA3DO95025 777 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 SLC25A14O95258 325 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 SNAI1O95863 264 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 PGA4P0DJD7 388 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PGA3P0DJD8 388 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 GFAPP14136 432 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 CSNK2A2P19784 350 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 USF1P22415 310 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 CD82P27701 267 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PFN2P35080 140 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 SSTR5P35346 364 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 CCT6AP40227 531 aaKnown RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 RFC3P40938 356 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 HCAR3P49019 387 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 P2RX1P51575 399 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 TAS2R39P59534 338 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PFN3P60673 137 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 SLAQ13239 276 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 RCAN2Q14206 197 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 C16orf72Q14CZ0 275 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 HIKESHIQ53FT3 197 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 NCCRP1Q6ZVX7 275 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 CDKL3Q8IVW4 592 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 UBALD2Q8IYN6 164 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 FAM71AQ8IYT1 594 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 METTL13Q8N6R0 699 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 CYB561D1Q8N8Q1 229 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 COX18Q8N8Q8 333 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ITFG1Q8TB96 612 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PIFOQ8TCI5 191 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ZNF707Q96C28 371 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 DCPSQ96C86 337 aaKnown RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 TM4SF18Q96CE8 201 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 NARS2Q96I59 477 aaKnown RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 CAMK2N2Q96S95 79 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 CALN1Q9BXU9 219 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PLA2G2FQ9BZM2 168 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 IL22Q9GZX6 179 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 DEFB129Q9H1M3 183 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 SPNS1Q9H2V7 528 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 VCXQ9H320 206 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 CLSTN2Q9H4D0 955 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 C8orf33Q9H7E9 229 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 MED4Q9NPJ6 270 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 PRSS16Q9NQE7 514 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 AGPAT4Q9NRZ5 378 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ZNF355PQ9NSJ1 428 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 DDX19AQ9NUU7 478 aaKnown RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 CTSFQ9UBX1 484 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 OPN4Q9UHM6 478 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ZNF223Q9UK11 482 aaPredicted RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 TMEM14AQ9Y6G1 99 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ZNFX1Q9P2E3 1918 aaKnown RBP1.63□□□□□ -2.15
CD47-203ENST00000398258 MYO10Q9HD67 2058 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 ADGRA3Q8IWK6 1321 aa1.63□□□□□ -2.15
CD47-203ENST00000398258 AHDC1Q5TGY3 1603 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 IGHV1OR15-9A0A0B4J2B8 117 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 IGKV1-8A0A0C4DH67 115 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 TMEM120BA0PK00 339 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 OR6C74A6NCV1 312 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 SLC22A20A6NK97 555 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 RSPH10B2B2RC85 870 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 NME4O00746 187 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 BET1O15155 118 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 CTDNEP1O95476 244 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 EIF4EP06730 217 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 RSPH10BP0C881 870 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 PGA5P0DJD9 388 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 SRMP19623 302 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 MSR1P21757 451 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 TUBG1P23258 451 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 BMI1P35226 326 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 SLC1A2P43004 574 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 RPS9P46781 194 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 GFERP55789 205 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 UBE2MP61081 183 aaKnown RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 RAP1AP62834 184 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 EIF4EBP1Q13541 118 aaPredicted RBP1.62□□□□□ -2.15
CD47-203ENST00000398258 DOC2AQ14183 400 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 C5orf47Q569G3 176 aa1.62□□□□□ -2.15
CD47-203ENST00000398258 GCSAMLQ5JQS6 135 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms