RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ACOXLQ9NUZ1 547 aa16.85■□□□□ 0.29
MAP1LC3A-203ENST00000397709 GNG8Q9UK08 70 aa16.85■□□□□ 0.29
MAP1LC3A-203ENST00000397709 GCN1Q92616 2671 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 RTTNQ86VV8 2226 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 J3QLW9 94 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ICMTO60725 284 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 SRSF10O75494 262 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ZNF19P17023 458 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 CCNOP22674 350 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 LOXP28300 417 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 WNT5AP41221 380 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 CX3CR1P49238 355 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 PRKXP51817 358 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 CDH15P55291 814 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 TPTEP56180 551 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 PSMA6P60900 246 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 SPOCK1Q08629 439 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 DAZAP2Q15038 168 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 OR2G6Q5TZ20 316 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 LIPNQ5VXI9 398 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ZNF773Q6PK81 442 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 DRAM2Q6UX65 266 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 TMPRSS11AQ6ZMR5 421 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 NANOGP1Q8N7R0 232 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ZNF485Q8NCK3 441 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 SPRYD4Q8WW59 207 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 PSMG3-AS1Q96PY0 264 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 DOK1Q99704 481 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ERGIC3Q9Y282 383 aa16.84■□□□□ 0.29
MAP1LC3A-203ENST00000397709 MYL12BO14950 172 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CRYAAP02489 173 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 APOC1P02654 83 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MT-ND5P03915 603 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TACSTD2P09758 323 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PCSK6P29122 969 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NR1H2P55055 460 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PRSS45Q7RTY3 260 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF283Q8N7M2 679 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RNF166Q96A37 237 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PELI1Q96FA3 418 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 C4orf45Q96LM5 186 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MND1Q9BWT6 205 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FAM206AQ9NX38 181 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 KCNN3Q9UGI6 736 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 LSM2Q9Y333 95 aaKnown RBP16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 GRIP1Q9Y3R0 1128 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 R4GMQ9 66 aa16.83■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ABCD4O14678 606 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MAP2K4P45985 399 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF121P58317 390 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TBCEQ15813 527 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF829Q3KNS6 432 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SP5Q6BEB4 398 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 COLCA1Q6ZS62 124 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NAA40Q86UY6 237 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SPARTQ8N0X7 666 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RORBQ92753 470 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 KCNS3Q9BQ31 491 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 C1QTNF5Q9BXJ0 243 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SNX5Q9Y5X3 404 aa16.82■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SPTAN1Q13813 2472 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 HEATR1Q9H583 2144 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TMEM269A0A1B0GVZ9 245 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ATP6V1G2-DDX39BF2Z307 99 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SMPD2O60906 423 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RPP14O95059 124 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PNPP00491 289 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CD3EP07766 207 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ANOS1P23352 680 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PSMB10P40306 273 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SLC6A9P48067 706 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RGS6P49758 472 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MMP16P51512 607 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 WNT4P56705 351 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MFGE8Q08431 387 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MRPL28Q13084 256 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 DOC2BQ14184 412 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF101Q8IZC7 436 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 GATAD2BQ8WXI9 593 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PIK3IP1Q96FE7 263 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TMEM204Q9BSN7 226 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TBCCD1Q9NVR7 557 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 EIF3KQ9UBQ5 218 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ICE1Q9Y2F5 2266 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CADP27708 2225 aa16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 USP9YO00507 2555 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 J3QW42 95 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 GOSR1O95249 250 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ANXA2P07355 339 aaKnown RBP16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SLC2A1P11166 492 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PCMT1P22061 227 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NR4A1P22736 598 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FDX2Q6P4F2 183 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ARL9Q6T311 187 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RFPL4BQ6ZWI9 263 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SVOPQ8N4V2 548 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TSPAN14Q8NG11 270 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 HAVCR2Q8TDQ0 301 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms