RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 C11orf91Q3C1V1 193 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 ALG10Q5BKT4 473 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 ZBTB37Q5TC79 503 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 METTL11BQ5VVY1 283 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 OR2T2Q6IF00 324 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 DLEU7Q6UYE1 221 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 MEPCEQ7L2J0 689 aaKnown RBP7.76□□□□□ -1.17
NEDD9-203ENST00000397378 PATL1Q86TB9 770 aaKnown RBP7.76□□□□□ -1.17
NEDD9-203ENST00000397378 NKAIN4Q8IVV8 208 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 OR5AS1Q8N127 324 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 CLDN22Q8N7P3 220 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 CELF2-AS1Q8N7Q2 184 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 SCCPDHQ8NBX0 429 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 OR5L1Q8NGL2 311 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 Q8TCH9 128 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 LRRC8CQ8TDW0 803 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 TMEM239Q8WW34 195 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 RASD2Q96D21 266 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 ZNF582Q96NG8 517 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-203ENST00000397378 POLR2J2Q9GZM3 115 aaKnown RBP7.76□□□□□ -1.17
NEDD9-203ENST00000397378 POLR2J3Q9H1A7 115 aaKnown RBP7.76□□□□□ -1.17
NEDD9-203ENST00000397378 ERVK-18Q9QC07 812 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 ATPIF1Q9UII2 106 aa7.76□□□□□ -1.17
NEDD9-203ENST00000397378 A0A0U1RQK1 487 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 HTR3EA5X5Y0 456 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 OR6C6A6NF89 314 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 A6NIZ1 184 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 F5H5P2 479 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 MSX2P35548 267 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-203ENST00000397378 RAP1BP61224 184 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 RAP1AP62834 184 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 EMX1Q04741 257 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-203ENST00000397378 COX10Q12887 443 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 TOP3AQ13472 1001 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-203ENST00000397378 KCNJ8Q15842 424 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 CYP51A1Q16850 503 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 SLC35E4Q6ICL7 350 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 EPGNQ6UW88 154 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 IGFN1Q86VF2 1251 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 MREGQ8N565 214 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 KLHDC1Q8N7A1 406 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 NPRL2Q8WTW4 380 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 TMEM255BQ8WV15 326 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 RASSF5Q8WWW0 418 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 CFHR4Q92496 578 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 LHX4Q969G2 390 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 TAMM41Q96BW9 452 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 TECTBQ96PL2 329 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 OR4F4Q96R69 305 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 CCDC167Q9P0B6 97 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 CTSZQ9UBR2 303 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 FBLN5Q9UBX5 448 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 VPREB3Q9UKI3 123 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 TMCC3Q9ULS5 477 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 SIGLEC9Q9Y336 463 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 MED31Q9Y3C7 131 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 USH1CQ9Y6N9 552 aa7.75□□□□□ -1.17
NEDD9-203ENST00000397378 IGHV3-64DA0A0J9YX35 117 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 NDUFA2O43678 99 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 OR5F1O95221 314 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 FBP1P09467 338 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 NHLRC4P0CG21 123 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-203ENST00000397378 RAD23AP54725 363 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 TAS2R41P59536 307 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 CTXN1P60606 82 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 MAB21L1Q13394 359 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 AQP6Q13520 282 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 CLEC12AQ5QGZ9 265 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 INTS11Q5TA45 600 aaKnown RBP7.74□□□□□ -1.17
NEDD9-203ENST00000397378 C1orf94Q6P1W5 598 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 C1orf122Q6ZSJ8 110 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 ANKRD42Q8N9B4 389 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 LRRC75AQ8NAA5 344 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 OR11L1Q8NGX0 322 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 OR1F12Q8NHA8 337 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 SLC26A7Q8TE54 656 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 SLC7A6Q92536 515 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 APOBEC3DQ96AK3 386 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-203ENST00000397378 CNTD2Q9H8S5 307 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 PALMDQ9NP74 551 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 TMEM100Q9NV29 134 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 PTTG3PQ9NZH4 202 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 ZNRD1Q9P1U0 126 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 RIMS3Q9UJD0 308 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 CAB39Q9Y376 341 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-203ENST00000397378 FAM96BQ9Y3D0 163 aa7.74□□□□□ -1.17
NEDD9-203ENST00000397378 RNASEK-C17orf49H0YIS7 233 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 LGALS8O00214 317 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 FBP2O00757 339 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 AHCYL1O43865 530 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 FAM20BO75063 409 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 ECDO95905 644 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-203ENST00000397378 VSIG10L2P0DP72 767 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 FPR3P25089 353 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 CD200P41217 278 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 CRYBA2P53672 197 aa7.73□□□□□ -1.17
NEDD9-203ENST00000397378 KRTAP10-11P60412 298 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms