RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 A0A1W2PPK0 400 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 AIPO00170 330 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 SS18L1O75177 396 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 IL2RAP01589 272 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 HRGP04196 525 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 FAM157BP0CG42 384 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 TIMP3P35625 211 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 MRPL49Q13405 166 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 MEP1BQ16820 701 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 AGAP6Q5VW22 663 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 PYHIN1Q6K0P9 492 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 BAIAP2L2Q6UXY1 529 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 SEM1Q6ZVN7 128 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 SYT9Q86SS6 491 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 GCNT2Q8N0V5 402 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 OR5H6Q8NGV6 325 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 OR52N5Q8NH56 324 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 NSMAFQ92636 917 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RCE1Q9Y256 329 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RP1L1Q8IWN7 2480 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 MRPL33O75394 65 aaKnown RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 SRSF10O75494 262 aaKnown RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 GLI4P10075 376 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 AGTR1P30556 359 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 CA7P43166 264 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 MAP2K3P46734 347 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 PITPNBP48739 271 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 ADAM8P78325 824 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 LRRTM1Q86UE6 522 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 SLC25A44Q96H78 314 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 ZFP3Q96NJ6 502 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 WACQ9BTA9 647 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 PARPBPQ9NWS1 579 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-207ENST00000397200 RABL2BQ9UNT1 228 aa13.12□□□□□ -0.31
CAPN3-207ENST00000397200 IFITM5A6NNB3 132 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 E9PLN8 166 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 SLC43A1O75387 559 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 KHDRBS3O75525 346 aaKnown RBP13.11□□□□□ -0.31
CAPN3-207ENST00000397200 C1QL1O75973 258 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 IGHG1P01857 330 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 SPARCP09486 303 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 SNRPBP14678 240 aaKnown RBP13.11□□□□□ -0.31
CAPN3-207ENST00000397200 SELENOPP49908 381 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 CARD17Q5XLA6 110 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 TMEM211Q6ICI0 200 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 LRRN1Q6UXK5 716 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 C19orf18Q8NEA5 215 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 GPR148Q8TDV2 347 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 OR2M2Q96R28 347 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 VKORC1Q9BQB6 163 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 ABHD6Q9BV23 337 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 ELOVL3Q9HB03 270 aa13.11□□□□□ -0.31
CAPN3-207ENST00000397200 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
CAPN3-207ENST00000397200 IGKV1D-43A0A0B4J1Z2 117 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 TOXO94900 526 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 UBL3O95164 117 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 WNT11O96014 354 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CRHP06850 196 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 TMIGD3P0DMS9 266 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ADRA2CP18825 462 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CEACAM8P31997 349 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-207ENST00000397200 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CLRN1P58418 232 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 FMODQ06828 376 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 PMPCAQ10713 525 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 RIPPLY2Q5TAB7 128 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 HPS1Q92902 700 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 FOXN4Q96NZ1 517 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms