RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PELI1Q96FA3 418 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 MAP6Q96JE9 813 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 DOK1Q99704 481 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 FUNDC2Q9BWH2 189 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 PLEKHF2Q9H8W4 249 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
SEC13-209ENST00000397117 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
SEC13-209ENST00000397117 DVL2O14641 736 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 RER1O15258 196 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 ZNF254O75437 659 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 LALBAP00709 142 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 EPXP11678 715 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 CELP19835 753 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 TPBGQ13641 420 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 DOC2BQ14184 412 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 LIPNQ5VXI9 398 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 DEGS2Q6QHC5 323 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 CFAP77Q6ZQR2 320 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 Q6ZT83 130 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 P2RY8Q86VZ1 359 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 KRTAP1-3Q8IUG1 177 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 ISOC1Q96CN7 298 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 LRRC46Q96FV0 321 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 WACQ9BTA9 647 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 ZNF629Q9UEG4 869 aaPredicted RBP11.56□□□□□ -0.56
SEC13-209ENST00000397117 ARID1AO14497 2285 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 RTTNQ86VV8 2226 aa11.56□□□□□ -0.56
SEC13-209ENST00000397117 A0A096LPE4 126 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 A0A1W2PPZ6 126 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 ZNF878C9JN71 531 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 E9PI62 339 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 ABHD16AO95870 558 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 INHBBP09529 407 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 BMP5P22003 454 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 OPRM1P35372 400 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 PSMB10P40306 273 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 OPRL1P41146 370 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 TMBIM6P55061 237 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 FOXG1P55316 489 aaPredicted RBP11.55□□□□□ -0.56
SEC13-209ENST00000397117 SCRN3Q0VDG4 424 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 GPR50Q13585 617 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 SLC36A2Q495M3 483 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 CCDC58Q4VC31 144 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 OR7E24Q6IFN5 339 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 ZNF544Q6NX49 715 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 RPL22L1Q6P5R6 122 aaKnown RBP11.55□□□□□ -0.56
SEC13-209ENST00000397117 ANKRD16Q6P6B7 361 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 RHOUQ7L0Q8 258 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 ZNF627Q7L945 461 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 SYT9Q86SS6 491 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 SKA3Q8IX90 412 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 PHC2Q8IXK0 858 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 FBXO17Q96EF6 278 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 NDUFB11Q9NX14 153 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 GRIP1Q9Y3R0 1128 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 LRP12Q9Y561 859 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 TIMM10BQ9Y5J6 103 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
SEC13-209ENST00000397117 TRBV2A0A0J9YWF9 115 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 CIB4A0PJX0 185 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 IL18BPO95998 194 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 ITGA5P08648 1049 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 CD8BP10966 210 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 PSMA1P25786 263 aaKnown RBP11.54□□□□□ -0.56
SEC13-209ENST00000397117 HSD11B1P28845 292 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 TGFBR2P37173 567 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 TGM4P49221 684 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 SSX1Q16384 188 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 TIMM50Q3ZCQ8 353 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 ARL9Q6T311 187 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 BEND4Q6ZU67 534 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 ANKRD13BQ86YJ7 626 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 ALDH16A1Q8IZ83 802 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 ZNF610Q8N9Z0 462 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 OR1K1Q8NGR3 316 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 NAA50Q9GZZ1 169 aaKnown RBP11.54□□□□□ -0.56
SEC13-209ENST00000397117 OPN3Q9H1Y3 402 aaPredicted RBP11.54□□□□□ -0.56
SEC13-209ENST00000397117 RNF121Q9H920 327 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 GALNT8Q9NY28 637 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 PLEK2Q9NYT0 353 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
SEC13-209ENST00000397117 TUBAL3A6NHL2 446 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 SGCEO43556 437 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 WNT11O96014 354 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CGAP01215 116 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ZNF32P17041 273 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 IGHV1-2P23083 117 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GABRA5P31644 462 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 GRB2P62993 217 aaKnown RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 SLC3A1Q07837 685 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 P2RY6Q15077 328 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CDK5R1Q15078 307 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 ZNF829Q3KNS6 432 aaPredicted RBP11.53□□□□□ -0.56
SEC13-209ENST00000397117 ELFN2Q5R3F8 820 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 CLEC9AQ6UXN8 241 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 SLC16A12Q6ZSM3 486 aa11.53□□□□□ -0.56
SEC13-209ENST00000397117 DPPA2Q7Z7J5 298 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms