RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NT5CQ8TCD5 201 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 PINX1Q96BK5 328 aaKnown RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SEH1LQ96EE3 360 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SMLR1H3BR10 107 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ALOX5APP20292 161 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 CCR9P51686 369 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 UBE2IP63279 158 aaKnown RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 C2orf76Q3KRA6 126 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 DBX2Q6ZNG2 339 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 BAGE3Q86Y29 109 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 TXNIPQ9H3M7 391 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 WSB2Q9NYS7 404 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 PCYT1BQ9Y5K3 369 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 R4GN57 208 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 FCMRO60667 390 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 LIPAP38571 399 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 NKX2-1P43699 371 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 UBE2G1P62253 170 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 FCN2Q15485 313 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 GABRG1Q8N1C3 465 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 GPR78Q96P69 363 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 PLA2G2FQ9BZM2 168 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ANKUB1A6NFN9 424 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 CCSO14618 274 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 PAX6P26367 422 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 RPL34P49207 117 aaKnown RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OR2G3Q8NGZ4 309 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 FBXO17Q96EF6 278 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 NMES1Q9C002 83 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 MT-CO3P00414 261 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 HAAOP46952 286 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF85Q03923 595 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OR2A2Q6IF42 318 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 CADM4Q8NFZ8 388 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OLIG1Q8TAK6 271 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 LRFN5Q96NI6 719 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SPACA5Q96QH8 159 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 NIPSNAP3BQ9BS92 247 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 HDGFL3Q9Y3E1 203 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 CHST2Q9Y4C5 530 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ARPC3O15145 178 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 GALR2O43603 387 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SIX6O95475 246 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SDHBP21912 280 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 NDUFA6P56556 154 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ACSM5Q6NUN0 579 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 FAM173AQ9BQD7 235 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 FN3KRPQ9HA64 309 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TAF9BQ9HBM6 251 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 HINT3Q9NQE9 182 aaKnown RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 R4GMQ9 66 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 EVPLQ92817 2033 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 FAM221AA4D161 298 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SPRY3O43610 288 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 WDR1O75083 606 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ERHP84090 104 aaKnown RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ELFN2Q5R3F8 820 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SPATA46Q5T0L3 261 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OR1J1Q8NGS3 322 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 YIPF5Q969M3 257 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 SPACA9Q96E40 222 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 ASB1Q9Y576 335 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM129A0AVI4 362 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 OR2W5A6NFC9 320 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 AIPO00170 330 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 GPR37O15354 613 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TSPAN12O95859 305 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
COL4A6-203ENST00000394872 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 GPR119Q8TDV5 335 aa9.42□□□□□ -0.9
COL4A6-203ENST00000394872 B4GALT3O60512 393 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 RAF1P04049 648 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 CRYBA1P05813 215 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SYT6Q5T7P8 510 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 C1orf210Q8IVY1 113 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 UQCC2Q9BRT2 126 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 WNT16Q9UBV4 365 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 A3GALT2U3KPV4 340 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 ACKR3P25106 362 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 DIO1P49895 249 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 OTPQ5XKR4 325 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 CYHR1Q6ZMK1 362 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 SKA3Q8IX90 412 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 OR2A1Q8NGT9 310 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 ONECUT1Q9UBC0 465 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 FLVCR1Q9Y5Y0 555 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TRPM3Q9HCF6 1732 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-203ENST00000394872 S100A11P31949 105 aa9.41□□□□□ -0.9
COL4A6-203ENST00000394872 TSEN54Q7Z6J9 526 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms