RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 KCNE3Q9Y6H6 103 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ANKRD36A6QL64 1941 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 IGHV3-20A0A0C4DH32 117 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 A0A1W2PR77 199 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 PLSCR5A0PG75 271 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 CXorf65A6NEN9 183 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR2W5A6NFC9 320 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR6C76A6NM76 312 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 SEC14L6B5MCN3 397 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 M0R143 59 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 HPP00738 406 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ZGLP1P0C6A0 271 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ANKRD34CP0C6C1 535 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 DAOP14920 347 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ABOP16442 354 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 TCN2P20062 427 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 RAB5AP20339 215 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 PPIAP62937 165 aaKnown RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 C17orf67Q0P5P2 114 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 RAET1LQ5VY80 246 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 PMS2CLQ68D20 193 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ZNF626Q68DY1 528 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OGFOD3Q6PK18 319 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 WDR74Q6RFH5 385 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 REC114Q7Z4M0 266 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ZNF610Q8N9Z0 462 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 PLPP5Q8NEB5 264 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR4D9Q8NGE8 314 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR56B1Q8NGI3 324 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 PHYHIPLQ96FC7 376 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 GPER1Q99527 375 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 NAA11Q9BSU3 229 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 GGACTQ9BVM4 153 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 NRSN2Q9GZP1 204 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 TLNRD1Q9H1K6 362 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 FGF20Q9NP95 211 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 NRIP3Q9NQ35 241 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 MMP26Q9NRE1 261 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 CENPMQ9NSP4 180 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 C2orf42Q9NWW7 574 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 B4GALT7Q9UBV7 327 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 VDAC3Q9Y277 283 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 SPAG17Q6Q759 2223 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 ANAPC1Q9H1A4 1944 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 GPR37O15354 613 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 HLA-DQB1P01920 261 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 GAAP10253 952 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 HTR1FP30939 366 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 RPL29P47914 159 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 LEG1Q6P5S2 330 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 Q6ZRG5 221 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 FAM181AQ8N9Y4 354 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 OR5M8Q8NGP6 311 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 OR1J2Q8NGS2 313 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 HAVCR2Q8TDQ0 301 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMEM255BQ8WV15 326 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 CLDN23Q96B33 292 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TM4SF19Q96DZ7 209 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 KIRREL1Q96J84 757 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMEM68Q96MH6 324 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 CNN2Q99439 309 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 SPSB2Q99619 263 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 OR11A1Q9GZK7 315 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 HEXA-AS1Q9H8Q6 139 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMEM9BQ9NQ34 198 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 SIDT1Q9NXL6 827 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 GDF2Q9UK05 429 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 FBXO4Q9UKT5 387 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 FBXO7Q9Y3I1 522 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 LSM5Q9Y4Y9 91 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 CSAG2Q9Y5P2 127 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMEM14AQ9Y6G1 99 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 FAM186AA6NE01 2351 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TRAV27A0A087WT01 109 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 A0A087WUU8 490 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 A0A0A6YYH2 397 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 A0A1W2PS29 197 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 A6NJ64 397 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 M0QYG6 137 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 CYB5BO43169 146 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 EIF4E2O60573 245 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 NKX2-2O95096 273 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 NDUFB6O95139 128 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 LIMS3P0CW19 117 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 LIMS4P0CW20 117 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 PTHLHP12272 177 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 RAB1AP62820 205 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 OR8G1Q15617 311 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 RAB11BQ15907 218 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 EXT1Q16394 746 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 PRICKLE4Q2TBC4 344 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMEM201Q5SNT2 666 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 C11orf87Q6NUJ2 197 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 C6orf15Q6UXA7 325 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 P4HA3Q7Z4N8 544 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 CPEB2Q7Z5Q1 589 aaKnown RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 NKAIN4Q8IVV8 208 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms