RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 WDR5BQ86VZ2 330 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 EXD3Q8N9H8 876 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 OR8D4Q8NGM9 314 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 SCPEP1Q9HB40 452 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 GLTPQ9NZD2 209 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 GNG12Q9UBI6 72 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 PRRG2O14669 202 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 IL2RAP01589 272 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF766Q5HY98 468 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 PTPMT1Q8WUK0 201 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 OR8B4Q96RC9 309 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 LHX9Q9NQ69 397 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 C1QCP02747 245 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 TOMM34Q15785 309 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 ACER2Q5QJU3 275 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 ANKRD16Q6P6B7 361 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 THSD4Q6ZMP0 1018 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 TMEM52Q8NDY8 209 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 PHF1O43189 567 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 CSF3P09919 207 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 ECI1P42126 302 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 MEOX1P50221 254 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 MSMO1Q15800 293 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 A0A0D9SG52 128 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 H7C1Q1 480 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 MSL3P1P0C860 447 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 NFYAP23511 347 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 ZNF136P52737 540 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 BTG1P62324 171 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 OXA1LQ15070 435 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 PAN3Q58A45 887 aaKnown RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 SLC22A25Q6T423 547 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 RFPL4BQ6ZWI9 263 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 SLC25A21Q9BQT8 299 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-202ENST00000392770 FLRT3Q9NZU0 649 aa14.92□□□□□ -0.02
SCN3B-202ENST00000392770 IFNA17P01571 189 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 FAM157BP0CG42 384 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 ERGP11308 486 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 EPXP11678 715 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CD226Q15762 336 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 GDPD3Q7L5L3 318 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PLPP5Q8NEB5 264 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 GON7Q9BXV9 100 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CES1P1Q9UKY3 287 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PATJQ8NI35 1801 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 M0R1B8 84 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 GPR137BO60478 399 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CEACAM16Q2WEN9 425 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 MRPL41Q8IXM3 137 aaKnown RBP14.91□□□□□ -0.02
SCN3B-202ENST00000392770 AKR7LQ8NHP1 331 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 C12orf10Q9HB07 376 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 NKX6-3A6NJ46 265 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 K7EPK0 472 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PLPP3O14495 311 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 AGPAT2O15120 278 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PPP3CBP16298 524 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 EMP3P54852 163 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PHLDA2Q53GA4 152 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 MDGA2Q7Z553 956 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 FAM71E2Q8N5Q1 922 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 DMBX1Q8NFW5 382 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 MOGAT1Q96PD6 335 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PLEKHA3Q9HB20 300 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CCL4P13236 92 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 EDDM3BP56851 147 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 EGFL6Q8IUX8 553 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PRSS35Q8N3Z0 413 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 TMEM185AQ8NFB2 350 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 M1APQ8TC57 530 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 KCNJ15Q99712 375 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 TP53TG5Q9Y2B4 290 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 TMEM235A6NFC5 223 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 PCMT1P22061 227 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CDKN2AP42771 156 aaKnown RBP14.91□□□□□ -0.02
SCN3B-202ENST00000392770 DPPA2Q7Z7J5 298 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 CADM3Q8N126 398 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 GABRG1Q8N1C3 465 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 DERL3Q96Q80 235 aa14.91□□□□□ -0.02
SCN3B-202ENST00000392770 ZFP36L2P47974 494 aaKnown RBP14.9□□□□□ -0.02
SCN3B-202ENST00000392770 CLN3Q13286 438 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 FAAP20Q6NZ36 180 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 F8W036 122 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 SIX6O95475 246 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 CRYBB2P43320 205 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 SLC37A1P57057 533 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 BLOC1S1P78537 153 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 RAB31Q13636 194 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 EDDM3AQ14507 147 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 FOXB1Q99853 325 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 AUNIPQ9H7T9 357 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 COPS3Q9UNS2 423 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 A0A0B4J2A0 478 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 LINC01387J3KSC0 135 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 CSRP3P50461 194 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 INSL4Q14641 139 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 SFRP5Q5T4F7 317 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 OR56B2PQ8NGI1 322 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 NUBPLQ8TB37 319 aa14.9□□□□□ -0.02
SCN3B-202ENST00000392770 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCN3B-202ENST00000392770 SHPKQ9UHJ6 478 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms