RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF561Q8N587 486 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR52N5Q8NH56 324 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NUBPLQ8TB37 319 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZPLD1Q8TCW7 415 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NMNAT2Q9BZQ4 307 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 MMP25Q9NPA2 562 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 DBHP09172 617 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZP1P60852 638 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ATPAF1Q5TC12 328 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLC22A25Q6T423 547 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF709Q8N972 641 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF681Q96N22 645 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ASB16Q96NS5 453 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SEMA6CQ9H3T2 930 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NXT1Q9UKK6 140 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR6C76A6NM76 312 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRAMEF26H0Y7S4 382 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM127O75204 238 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 NXPH3O95157 252 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PTAFRP25105 342 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 DPP4P27487 766 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 SSBP1Q04837 148 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 FABP9Q0Z7S8 132 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR13H1Q8NG92 308 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 TERB2Q8NHR7 220 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZMIZ1Q9ULJ6 1067 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF638Q14966 1978 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 FAM186AA6NE01 2351 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 STMND1H3BQB6 276 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 GREM1O60565 184 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 IFNA1P01562 189 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 F2RL1P55085 397 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PPIAP62937 165 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 DLX2Q07687 328 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 GPR119Q8TDV5 335 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLAMF6Q96DU3 332 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 SGCZQ96LD1 299 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 TOX2Q96NM4 488 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 HHIPQ96QV1 700 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 LRP12Q9Y561 859 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 XRCC2O43543 280 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ICOSLGO75144 302 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ADAP1O75689 374 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR7C1O76099 320 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF728P0DKX0 622 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRSS35Q8N3Z0 413 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLC25A38Q96DW6 304 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 RRNAD1Q96FB5 475 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR2A5Q96R48 311 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 KNTC1P50748 2209 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 IFNA10P01566 189 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 CRYBA1P05813 215 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 H2BFSP57053 126 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 INPP5JQ15735 1006 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 GUCA2BQ16661 112 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRICKLE4Q2TBC4 344 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 FAM199XQ6PEV8 388 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 CBLN3Q6UW01 205 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 PLPP5Q8NEB5 264 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 R4GMQ9 66 aa11.86□□□□□ -0.51
TRAPPC9-201ENST00000389328 ANK1P16157 1881 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 MED19A0JLT2 244 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 TP53I11O14683 189 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 LILRB5O75023 590 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 MT-ATP6P00846 226 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 SPP1P10451 314 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 CD37P11049 281 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 CSNK1A1P48729 337 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 SSX2Q16385 188 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM128Q5BJH2 165 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR5L1Q8NGL2 311 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 TOE1Q96GM8 510 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 TCTN2Q96GX1 697 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLX1AQ9BQ83 275 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 NIPSNAP3BQ9BS92 247 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 UQCC1Q9NVA1 299 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 CHRNA9Q9UGM1 479 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 CXCL10P02778 98 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 SERPINE2P07093 398 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 CD1CP29017 333 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 GABREP78334 506 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 HAGHQ16775 308 aa11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM176BQ3YBM2 270 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-201ENST00000389328 LILRA6Q6PI73 481 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms