RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 OR51J1Q9H342 316 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 KLK11Q9UBX7 282 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 PCDHGA1Q9Y5H4 931 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.46■□□□□ 0.87
VPS16-201ENST00000380443 LINC01387J3KSC0 135 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 PEX14O75381 377 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 MSR1P21757 451 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 EIF1AXP47813 144 aaKnown RBP20.46■□□□□ 0.87
VPS16-201ENST00000380443 CCR6P51684 374 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 NDUFA5Q16718 116 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 GSG1Q2KHT4 349 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 TP63Q9H3D4 680 aaPredicted RBP20.46■□□□□ 0.87
VPS16-201ENST00000380443 NELFAQ9H3P2 528 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 TMEM138Q9NPI0 162 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 A0A0J9YW62 118 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 LDLRAD4O15165 306 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 MT-CO3P00414 261 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 GZMKP49863 264 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 TMEM123Q8N131 208 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 B3GNT4Q9C0J1 378 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 C20orf85Q9H1P6 137 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 SCPEP1Q9HB40 452 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 DLL3Q9NYJ7 618 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 ASH2LQ9UBL3 628 aa20.46■□□□□ 0.87
VPS16-201ENST00000380443 G3V3Y1 287 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 TMIGD3P0DMS9 266 aaPredicted RBP20.45■□□□□ 0.86
VPS16-201ENST00000380443 CNR1P21554 472 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 CDAP32320 146 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 PRSS3P35030 304 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 CDK10Q15131 360 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 MTFR2Q6P444 385 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 GJC3Q8NFK1 279 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 FGGYQ96C11 551 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 UTP23Q9BRU9 249 aaKnown RBP20.45■□□□□ 0.86
VPS16-201ENST00000380443 ATG5Q9H1Y0 275 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 SLCO5A1Q9H2Y9 848 aa20.45■□□□□ 0.86
VPS16-201ENST00000380443 PNRC2Q9NPJ4 139 aaKnown RBP20.45■□□□□ 0.86
VPS16-201ENST00000380443 SCGNO76038 276 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 APOC1P02654 83 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 CCL1P22362 96 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 EFNB2P52799 333 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 CLDN6P56747 220 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 CCDC157Q569K6 752 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 ZNF529Q6P280 563 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 ZNF813Q6ZN06 617 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 CCDC54Q8NEL0 328 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 OR1M1Q8NGA1 313 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 OR14L1PQ8NHC6 308 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 MED30Q96HR3 178 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 IP6K3Q96PC2 410 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 PTTG3PQ9NZH4 202 aa20.44■□□□□ 0.86
VPS16-201ENST00000380443 TRAV18A0A075B6X5 111 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 A0A1B0GTI1 187 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 CDK2AP1O14519 115 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 TM4SF5O14894 197 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 DHHO43323 396 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 TGM6O95932 706 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ENPP1P22413 925 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ZNF84P51523 738 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 IFITM2Q01629 132 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 SPOCK1Q08629 439 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 FAPQ12884 760 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 RAB12Q6IQ22 244 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 PGAP1Q75T13 922 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 SLC22A24Q8N4F4 322 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 JAGN1Q8N5M9 183 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 BEX2Q9BXY8 128 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ABI3Q9P2A4 366 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ZNF107Q9UII5 783 aaPredicted RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 FOXD3Q9UJU5 478 aaPredicted RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 RAB22AQ9UL26 194 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 MRPS18BQ9Y676 258 aaKnown RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 DCDC2BA2VCK2 349 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 TNFSF11O14788 317 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 GMDSO60547 372 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 KLK2P20151 261 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 RAB3AP20336 220 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ID4P47928 161 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 MECP2P51608 486 aaKnown RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 ACTBP60709 375 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 ACTG1P63261 375 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 HIST1H3AP68431 136 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 PLA2G7Q13093 441 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 TNK1Q13470 666 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 HIST2H3PS2Q5TEC6 136 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 B3GNTL1Q67FW5 361 aaPredicted RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 SLC25A25Q6KCM7 469 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 HIST2H3AQ71DI3 136 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 C20orf196Q8IYI0 205 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 OR51A2Q8NGJ7 313 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 PSMF1Q92530 271 aa20.43■□□□□ 0.86
VPS16-201ENST00000380443 METTL17Q9H7H0 456 aaPredicted RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 BOKQ9UMX3 212 aaPredicted RBP20.43■□□□□ 0.86
VPS16-201ENST00000380443 METTL21EPA6NDL7 271 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 TERTO14746 1132 aaKnown RBP20.42■□□□□ 0.86
VPS16-201ENST00000380443 ZNF20P17024 532 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 DLSTP36957 453 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 CARD18P57730 90 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 SGCAQ16586 387 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 METTL11BQ5VVY1 283 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms