RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CCSMST1Q4G0I0 132 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 LRRC56Q8IYG6 542 aaPredicted RBP11.33□□□□□ -0.6
CHD3-203ENST00000380358 BCO1Q9HAY6 547 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 MED29Q9NX70 200 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 CTNSO60931 367 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 SULT1A2P50226 295 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 TAS2R45P59539 299 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 ZDHHC11Q9H8X9 412 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 LOC100289279A0A1B0GTE1 492 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 H7BYZ3 331 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 ZNF623O75123 536 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 CSO75390 466 aaKnown RBP11.33□□□□□ -0.6
CHD3-203ENST00000380358 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 TMEM135Q86UB9 458 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 RPEQ96AT9 228 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 GPR87Q9BY21 358 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 CHD4Q14839 1912 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 ACOT8O14734 319 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 TSLPQ969D9 159 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 TMPRSS13Q9BYE2 586 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 GLIPR2Q9H4G4 154 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 PRDM7Q9NQW5 492 aa11.33□□□□□ -0.6
CHD3-203ENST00000380358 SDR39U1Q9NRG7 319 aaPredicted RBP11.33□□□□□ -0.6
CHD3-203ENST00000380358 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
CHD3-203ENST00000380358 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ICOSLGO75144 302 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 AOAHP28039 575 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 GDF7Q7Z4P5 450 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CCL4L1Q8NHW4 92 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CIDEAO60543 219 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 IL5P05113 134 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 GCSHP23434 173 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CCL7P80098 99 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CDK5Q00535 292 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CPN1P15169 458 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ZNF133P52736 654 aaPredicted RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 RACK1P63244 317 aaKnown RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 OR4D10Q8NGI6 311 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 NTN4Q9HB63 628 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 FBXO34Q9NWN3 711 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CCDC187A0A096LP49 1063 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 HELTA6NFD8 242 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 H7C2G1 150 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 PPP1R2P9O14990 202 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 SLCO2B1O94956 709 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 SLC2A10O95528 541 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ARNTP27540 789 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 EIF1P41567 113 aaKnown RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 PRSS12P56730 875 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 TRMT12Q53H54 448 aaKnown RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 CSN3P07498 182 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 CLEC2LP0C7M8 214 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 RBPMS2Q6ZRY4 209 aaKnown RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 MBOAT2Q6ZWT7 520 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 RFESDQ8TAC1 157 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 BCL2L2Q92843 193 aaPredicted RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 MS4A18H0YCH9 400 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 AREGP15514 252 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ORM2P19652 201 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ZNF91Q05481 1191 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 MS4A18Q3C1V0 323 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 UBE3DQ7Z6J8 389 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 MUC15Q8N387 334 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 ZPBPQ9BS86 351 aa11.32□□□□□ -0.6
CHD3-203ENST00000380358 KLF13Q9Y2Y9 288 aaPredicted RBP11.32□□□□□ -0.6
CHD3-203ENST00000380358 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 AQP8O94778 261 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 LYZP61626 148 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 OR2F1Q13607 317 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 KEAP1Q14145 624 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 TIGITQ495A1 244 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 TDHQ8IZJ6 230 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 WBP2Q969T9 261 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 FAM109BQ6ICB4 259 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 SPRED1Q7Z699 444 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 OR13C5Q8NGS8 318 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 OLIG1Q8TAK6 271 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 CXorf36Q9H7Y0 433 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 CLEC2DQ9UHP7 191 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 ZNF691Q5VV52 312 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms