RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF321PQ8N8H1 164 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 PCDHB10Q9UN67 800 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 FAM230AA0A1W2PPH8 454 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 TMEM200CA6NKL6 621 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 NMBP08949 121 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 EFNB1P98172 346 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 MFGE8Q08431 387 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-202ENST00000379826 RSU1Q15404 277 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 CD226Q15762 336 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 TOMM34Q15785 309 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-202ENST00000379826 STPG2Q8N412 459 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 FNDC9Q8TBE3 224 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SLC17A2O00624 439 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 AQP8O94778 261 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 FMODQ06828 376 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 DEFB109BQ30KR1 87 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 MEX3BQ6ZN04 569 aaKnown RBP10.25□□□□□ -0.77
SMAD9-202ENST00000379826 CDC20BQ86Y33 519 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 NAXDQ8IW45 347 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 KCNRGQ8N5I3 272 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 OR1S2Q8NGQ3 325 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 OR10Z1Q8NGY1 313 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 LHFPL5Q8TAF8 219 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 WNT2BQ93097 391 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 TMEM59Q9BXS4 323 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 FAM60AQ9NP50 221 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 OBP2AQ9NY56 170 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 KCNIP3Q9Y2W7 256 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 HMSDA8MTL9 139 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 CYR61O00622 381 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SEC14L5O43304 696 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 B3GALNT1O75752 331 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 LIMK1P53667 647 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 UCNP55089 124 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 H2BFSP57053 126 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 HERV-K104P61576 105 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 C1QL3Q5VWW1 255 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 NPSR1Q6W5P4 371 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 C14orf79Q96F83 325 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 ABHD6Q9BV23 337 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 NUDT9Q9BW91 350 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF160Q9HCG1 818 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 EMC4Q5J8M3 183 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 GLRX5Q86SX6 157 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SGPP2Q8IWX5 399 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 TAF9BQ9HBM6 251 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF117Q03924 483 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 PRSS35Q8N3Z0 413 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SLC5A7Q9GZV3 580 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 SLCO5A1Q9H2Y9 848 aa10.25□□□□□ -0.77
SMAD9-202ENST00000379826 EXOSC3Q9NQT5 275 aaKnown RBP10.25□□□□□ -0.77
SMAD9-202ENST00000379826 NPIPA2E9PIF3 369 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 NPIPA3F8WFD2 350 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 K7EPK0 472 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 NXPH3O95157 252 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 FCGR2AP12318 317 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF43P17038 809 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 SULF2Q8IWU5 870 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 FAM71E2Q8N5Q1 922 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OR1M1Q8NGA1 313 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 C4orf45Q96LM5 186 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 DKKL1Q9UK85 242 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 FAM96BQ9Y3D0 163 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 SHISA8B8ZZ34 492 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OR2T1O43869 369 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 F12P00748 615 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OR8U9P0C7N5 309 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 PSMB6P28072 239 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 NHLRC3Q5JS37 347 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 SLC46A1Q96NT5 459 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OR8B4Q96RC9 309 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 R4GMQ9 66 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 BLACEA4D250 179 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 WDPCPO95876 746 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 CTSBP07858 339 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 CTRB1P17538 263 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 GNMTQ14749 295 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 C2orf68Q2NKX9 166 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 CTRB2Q6GPI1 263 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 LPCAT3Q6P1A2 487 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 TMEM200AQ86VY9 491 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF485Q8NCK3 441 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 RBM24Q9BX46 236 aaKnown RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 SCPEP1Q9HB40 452 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 PTRH2Q9Y3E5 179 aaKnown RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 OIP5O43482 229 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 SCGNO76038 276 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 RPA2P15927 270 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ALOX5APP20292 161 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF658BQ4V348 819 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF775Q96BV0 537 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-202ENST00000379826 NPAS1Q99742 590 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms