RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NUDT14O95848 222 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 CST4P01036 141 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 OR10J4P0C629 311 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 ATF1P18846 271 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 CXCR1P25024 350 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 XCR1P46094 333 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 ADIRFQ15847 76 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 SMIM14Q96QK8 99 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 VAX2Q9UIW0 290 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF281Q9Y2X9 895 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 HEPACAM2A8MVW5 462 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GNG7O60262 68 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 RCBTB2O95199 551 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ARAFP10398 606 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 NDUFV2P19404 249 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TNFSF4P23510 183 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 LCN6P62502 163 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 EFNB1P98172 346 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 HLA-DQA1Q5Y7H0 255 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 SBSNQ6UWP8 590 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 PSMF1Q92530 271 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 SLC41A2Q96JW4 573 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 PHIPQ8WWQ0 1821 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ERI3O43414 337 aaKnown RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CX3CR1P49238 355 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 KRTDAPP60985 99 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TBPL1P62380 186 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GPR18Q14330 331 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GNMTQ14749 295 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 COL24A1Q17RW2 1714 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM255AQ5JRV8 349 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 RPTNQ6XPR3 784 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TMPPEQ6ZT21 453 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 OVCH1Q7RTY7 1134 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 OR2T27Q8NH04 317 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 STT3BQ8TCJ2 826 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CMKLR1Q99788 373 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 MESP1Q9BRJ9 268 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GPR174Q9BXC1 333 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 C1QTNF3Q9BXJ4 246 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CNTD2Q9H8S5 307 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 H3BQ15 152 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 RNASET2O00584 256 aaKnown RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF207O43670 478 aaKnown RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GPR37L1O60883 481 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 MAS1P04201 325 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 LIMS3P0CW19 117 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 LIMS4P0CW20 117 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 LBX1P52954 281 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 SELENOTP62341 195 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TP53I3Q53FA7 332 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 PODNL1Q6PEZ8 512 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 COMMD6Q7Z4G1 85 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 OR11L1Q8NGX0 322 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 SLC46A2Q9BY10 475 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ZDHHC11Q9H8X9 412 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CDC14BO60729 498 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 CBR3O75828 277 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 IGLV3-25P01717 112 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 LCATP04180 440 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ACP5P13686 325 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 GPR157Q5UAW9 335 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 C12orf73Q69YU5 71 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ANKRD16Q6P6B7 361 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 DPPA3Q6W0C5 159 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 MOB1BQ7L9L4 216 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 NIT1Q86X76 327 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 OR5D18Q8NGL1 313 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 WBP1Q96G27 269 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TRMT61BQ9BVS5 477 aaKnown RBP10.7□□□□□ -0.7
NPHP4-202ENST00000378161 EGLN1Q9GZT9 426 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 NEU3Q9UQ49 428 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 TIMM10BQ9Y5J6 103 aa10.7□□□□□ -0.7
NPHP4-202ENST00000378161 ARRDC5A6NEK1 342 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 IGHA2P01877 340 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 VSIG10L2P0DP72 767 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 TACR1P25103 407 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 PXNP49023 591 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 ZNF92Q03936 586 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 HEPN1Q6WQI6 88 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 SIGLECL1Q8N7X8 197 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 COX18Q8N8Q8 333 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 OR6K6Q8NGW6 343 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 TMEM106AQ96A25 262 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 CITED1Q99966 193 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 TIMM29Q9BSF4 260 aa10.69□□□□□ -0.7
NPHP4-202ENST00000378161 RYDENQ9NUL5 291 aaKnown RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 SIDT1Q9NXL6 827 aaKnown RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 MRPS18CQ9Y3D5 142 aaKnown RBP10.69□□□□□ -0.7
NPHP4-202ENST00000378161 FLVCR1Q9Y5Y0 555 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms