RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FGL1Q08830 312 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 BAK1Q16611 211 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 DMRTC1Q5HYR2 192 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 VHLLQ6RSH7 139 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 CCDC190Q86UF4 302 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 SGPP2Q8IWX5 399 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 B4E171 279 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 KLK10O43240 276 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 CSF3P09919 207 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ANKRD34CP0C6C1 535 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 UBBP0CG47 229 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 TSPAN7P41732 249 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 TAS2R20P59543 309 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ASAH1Q13510 395 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 CADM3Q8N126 398 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 GALNT16Q8N428 558 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 C12orf45Q8N5I9 185 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-202ENST00000377797 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 SRRQ9GZT4 340 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ARPC5O15511 151 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 SNAPC5O75971 98 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 CHRM2P08172 466 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 DEFA5Q01523 94 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF85Q03923 595 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 C2orf76Q3KRA6 126 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 CDONQ4KMG0 1287 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 VASH2Q86V25 355 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 COMTD1Q86VU5 262 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 FAM181AQ8N9Y4 354 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TMEM82A0PJX8 343 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TTLL8A6PVC2 850 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 LINC01387J3KSC0 135 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 M0QYG6 137 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 PTP4A3O75365 173 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TAS2R31P59538 309 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 IRF3Q14653 427 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
TCOF1-202ENST00000377797 ELMOD3Q96FG2 381 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 SLCO5A1Q9H2Y9 848 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 F5H5P2 479 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 RER1O15258 196 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TSPAN2O60636 221 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 IGHA1P01876 353 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 SP9P0CG40 484 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 FGF5P12034 268 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 FAM198BQ6UWH4 519 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
TCOF1-202ENST00000377797 AKR7LQ8NHP1 331 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 PSMF1Q92530 271 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TRIB1Q96RU8 372 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 CHRNA10Q9GZZ6 450 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF175Q9Y473 711 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 LIPT2A6NK58 231 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
TCOF1-202ENST00000377797 ATF1P18846 271 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 IL1F10Q8WWZ1 152 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF486Q96H40 463 aaPredicted RBP13□□□□□ -0.33
TCOF1-202ENST00000377797 FOXB1Q99853 325 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 RDH8Q9NYR8 311 aa13□□□□□ -0.33
TCOF1-202ENST00000377797 TRGV5A0A0B4J1U4 118 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 GALP22466 123 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 PI4KAP42356 2102 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 IDH3GP51553 393 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-202ENST00000377797 IGLV3-21P80748 117 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-202ENST00000377797 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 RNF128Q8TEB7 428 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 DEDD2Q8WXF8 326 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 COPS3Q9UNS2 423 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 NEUROG3Q9Y4Z2 214 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 TIAF1O95411 115 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 CELA2AP08217 269 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 ADH6P28332 368 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 ELFN2Q5R3F8 820 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 OR10K1Q8NGX5 313 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 RNF170Q96K19 258 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 DUSP13Q9UII6 198 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 ACACAQ13085 2346 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 SLC22A20A6NK97 555 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 TEX46H3BTG2 121 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 GABRB1P18505 474 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 ETV6P41212 452 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 IKZF1Q13422 519 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 GNMTQ14749 295 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF766Q5HY98 468 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 SULF2Q8IWU5 870 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 OR14J1Q9UGF5 321 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 TRAV17A0A0B4J275 112 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 RRAS2P62070 204 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-202ENST00000377797 TEX19Q8NA77 164 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 FLVCR1-AS1Q8TAF5 88 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 PPP1R35Q8TAP8 253 aa12.99□□□□□ -0.33
TCOF1-202ENST00000377797 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms