RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RAB39BQ96DA2 213 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 DDOQ99489 341 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 FEVQ99581 238 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 RBM4Q9BWF3 364 aaKnown RBP14.28□□□□□ -0.12
HMGN4-201ENST00000377575 PTTG3PQ9NZH4 202 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 F5H5K5 113 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 H3BN98 237 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 WNT9BO14905 357 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 SURF4O15260 269 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 TNFRSF1AP19438 455 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 SLC25A1P53007 311 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 MVKQ03426 396 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 CRMP1Q14194 572 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 HLXQ14774 488 aaPredicted RBP14.27□□□□□ -0.13
HMGN4-201ENST00000377575 CR1LQ2VPA4 569 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 KRTAP27-1Q3LI81 207 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF362Q5T0B9 420 aaPredicted RBP14.27□□□□□ -0.13
HMGN4-201ENST00000377575 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 OR51F2Q8NH61 342 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 SPTSSAQ969W0 71 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 C1QTNF5Q9BXJ0 243 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF556Q9HAH1 456 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 PNRC2Q9NPJ4 139 aaKnown RBP14.27□□□□□ -0.13
HMGN4-201ENST00000377575 TREM2Q9NZC2 230 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 PDP1Q9P0J1 537 aaPredicted RBP14.27□□□□□ -0.13
HMGN4-201ENST00000377575 WIPI2Q9Y4P8 454 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 CACNG2Q9Y698 323 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 COMMD3-BMI1R4GMX3 469 aa14.27□□□□□ -0.13
HMGN4-201ENST00000377575 ATRQ13535 2644 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 TCRBV3S1A0A5B6 114 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 TVP23AA6NH52 213 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 ANPEPP15144 967 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 SELEP16581 610 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 SPI1P17947 270 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 FMO3P31513 532 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 GRK5P34947 590 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 RASSF2P50749 326 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 BLVRAP53004 296 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 TPTEP56180 551 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 CBX1P83916 185 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 MALLQ13021 153 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 IL17RELQ6ZVW7 336 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 OR5AS1Q8N127 324 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 OR51L1Q8NGJ5 315 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 OR6K6Q8NGW6 343 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF582Q96NG8 517 aaPredicted RBP14.26□□□□□ -0.13
HMGN4-201ENST00000377575 HCAR1Q9BXC0 346 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 NMNAT2Q9BZQ4 307 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF665Q9H7R5 613 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 CMC2Q9NRP2 79 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 IL19Q9UHD0 177 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 TMEFF2Q9UIK5 374 aaPredicted RBP14.26□□□□□ -0.13
HMGN4-201ENST00000377575 POMPQ9Y244 141 aa14.26□□□□□ -0.13
HMGN4-201ENST00000377575 FAM157AC9JC47 383 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 M0R135 149 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 FKBP6O75344 327 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 GYPBP06028 91 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 MSMBP08118 114 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 SPARCP09486 303 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 ENTPD1P49961 510 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 ERFP50548 548 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 LMO4P61968 165 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 OR2T2Q6IF00 324 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 SLC27A4Q6P1M0 643 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 Q6ZR03 302 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 COLCA1Q6ZS62 124 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 TMEM186Q96B77 213 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF799Q96GE5 643 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 MAP6Q96JE9 813 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 GAL3ST1Q99999 423 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
HMGN4-201ENST00000377575 DNAJB9Q9UBS3 223 aa14.25□□□□□ -0.13
HMGN4-201ENST00000377575 ISPDA4D126 451 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 LCATP04180 440 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 PAICSP22234 425 aaKnown RBP14.24□□□□□ -0.13
HMGN4-201ENST00000377575 RPS27P42677 84 aaKnown RBP14.24□□□□□ -0.13
HMGN4-201ENST00000377575 SLC6A9P48067 706 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 BNIP1Q12981 228 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 RSPO1Q2MKA7 263 aaPredicted RBP14.24□□□□□ -0.13
HMGN4-201ENST00000377575 LYPD4Q6UWN0 246 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 DCXRQ7Z4W1 244 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 TMEM179BQ7Z7N9 219 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 ATG16L2Q8NAA4 619 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 OR8G5Q8NG78 346 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 OR13G1Q8NGZ3 307 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 ITLN1Q8WWA0 313 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 ZNRF4Q8WWF5 429 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 OR2V2Q96R30 315 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 COPS4Q9BT78 406 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 WDR76Q9H967 626 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 LPAR2Q9HBW0 351 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 TMEM106BQ9NUM4 274 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 HIF1ANQ9NWT6 349 aa14.24□□□□□ -0.13
HMGN4-201ENST00000377575 MXRA5Q9NR99 2828 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 TRAV20A0A0B4J274 112 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 GSC2O15499 205 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 ATP5HO75947 161 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms