RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SAV1Q9H4B6 383 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 DHHO43323 396 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 ARRB2P32121 409 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 DOC2BQ14184 412 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 ANKRD37Q7Z713 158 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 UBAC2Q8NBM4 344 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 LRFN5Q96NI6 719 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 RANGRFQ9HD47 186 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 FAM221AA4D161 298 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 TNFSF14O43557 240 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 ZNF26P17031 533 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 NME2P22392 152 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 LACC1Q8IV20 430 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 OR2AE1Q8NHA4 323 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 GINS3Q9BRX5 216 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 R4GMQ9 66 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 OR2A25A4D2G3 310 aa12.33□□□□□ -0.43
GPC6-201ENST00000377047 CPEP16870 476 aa12.33□□□□□ -0.43
GPC6-201ENST00000377047 SSPNQ14714 243 aa12.33□□□□□ -0.43
GPC6-201ENST00000377047 OR10G3Q8NGC4 313 aa12.33□□□□□ -0.43
GPC6-201ENST00000377047 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.43
GPC6-201ENST00000377047 OR10J4P0C629 311 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 AARDQ4LEZ3 155 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 FCRL1Q96LA6 429 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 ING1Q9UK53 422 aaPredicted RBP12.33□□□□□ -0.44
GPC6-201ENST00000377047 FABP1P07148 127 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 CTXN2P0C2S0 81 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
GPC6-201ENST00000377047 SFTPA1Q8IWL2 248 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 OR4D9Q8NGE8 314 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 MBOAT4Q96T53 435 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 NARFLQ9H6Q4 476 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 TCRBP04435 133 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 ZNF121P58317 390 aaPredicted RBP12.33□□□□□ -0.44
GPC6-201ENST00000377047 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 OR6K3Q8NGY3 331 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 C17orf50Q8WW18 174 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 GNRHR2Q96P88 292 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 C19orf43Q9BQ61 176 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 MGST1P10620 155 aaKnown RBP12.33□□□□□ -0.44
GPC6-201ENST00000377047 ELK1P19419 428 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
GPC6-201ENST00000377047 OR51S1Q8NGJ8 323 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 PRELID1Q9Y255 219 aa12.33□□□□□ -0.44
GPC6-201ENST00000377047 PPP3CBP16298 524 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 TESK1Q15569 626 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 SLC35E1Q96K37 410 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
GPC6-201ENST00000377047 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 SCAF4O95104 1147 aaKnown RBP12.32□□□□□ -0.44
GPC6-201ENST00000377047 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 ALOX5APP20292 161 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 TRABD2BA6NFA1 517 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 ZNF83P51522 516 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 PCK2Q16822 640 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 OR51A4Q8NGJ6 313 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
GPC6-201ENST00000377047 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 KCNIP2Q9NS61 270 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 SLC22A13Q9Y226 551 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 ZNF321PQ8N8H1 164 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 SLC38A9Q8NBW4 561 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 S1PR3Q99500 378 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 K7EQS6 105 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 WDR1O75083 606 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 HBE1P02100 147 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 PAQR6Q6TCH4 344 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 CDC20BQ86Y33 519 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 GABRG1Q8N1C3 465 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 IKZF5Q9H5V7 419 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 BIN3Q9NQY0 253 aa12.32□□□□□ -0.44
GPC6-201ENST00000377047 A0A1W2PR80 420 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 F6UZH7 168 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ADH4P08319 380 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 BMP5P22003 454 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 F2RP25116 425 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ACER2Q5QJU3 275 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 OR13C5Q8NGS8 318 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 FOXB1Q99853 325 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 USP54Q70EL1 1684 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 A0A087WUJ7 227 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 PMS2P2O95744 297 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 PEX11BO96011 259 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 RAF1P04049 648 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 TBPP20226 339 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 UBE2KP61086 200 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms