RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GDNFP39905 211 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 SRP9P49458 86 aaKnown RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 CLDN18P56856 261 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 TOMM34Q15785 309 aaPredicted RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 OLFML2AQ68BL7 652 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 LRRN1Q6UXK5 716 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 IDO2Q6ZQW0 420 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ATG4DQ86TL0 474 aaPredicted RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 JAZF1Q86VZ6 243 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 CMTM4Q8IZR5 234 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 LRRC75AQ8NAA5 344 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ZNF680Q8NEM1 530 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 OR4K17Q8NGC6 315 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ZFP3Q96NJ6 502 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 DERL3Q96Q80 235 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 NMNAT3Q96T66 252 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 NOX4Q9NPH5 578 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 KLHL9Q9P2J3 617 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 EIF3KQ9UBQ5 218 aaKnown RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 SCP2D1Q9UJQ7 156 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ZNF222Q9UK12 451 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 FBXL3Q9UKT7 428 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 VDAC3Q9Y277 283 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
VRK3-202ENST00000377011 ADAM18Q9Y3Q7 739 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 AKAP9Q99996 3911 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 IGKV1D-42A0A075B6H8 117 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 IGLV3-32A0A0A0MS00 114 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 OR2M5A3KFT3 312 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ELOA3DA6NLF2 546 aaPredicted RBP10.96□□□□□ -0.65
VRK3-202ENST00000377011 SMLR1H3BR10 107 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ZNF593O00488 134 aaPredicted RBP10.96□□□□□ -0.65
VRK3-202ENST00000377011 PHYHO14832 338 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 EFNA2O43921 213 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 SELENOFO60613 162 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 KRT33AO76009 404 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 SDHAP31040 664 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ZNF117Q03924 483 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 TFF3Q07654 80 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ZNF74Q16587 644 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ELOA3BQ3SY89 546 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 FAM122BQ7Z309 247 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 C9orf106Q8NAJ2 232 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 ELOA3Q8NG57 546 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 POC1BQ8TC44 478 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 TBL1XR1Q9BZK7 514 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 CLEC4MQ9H2X3 399 aaPredicted RBP10.96□□□□□ -0.65
VRK3-202ENST00000377011 UBQLN4Q9NRR5 601 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 DKKL1Q9UK85 242 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 NUP50Q9UKX7 468 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 V9GY05 133 aa10.96□□□□□ -0.65
VRK3-202ENST00000377011 TRBV5-5A0A0J9YX44 114 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 GPR171O14626 319 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 PIN1P1O15428 100 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ICMTO60725 284 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 CLDN14O95500 239 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 UBL4AP11441 157 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 UQCRC1P31930 480 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 HCCSP53701 268 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 DSCR4P56555 118 aaPredicted RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 FOXF2Q12947 444 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 Q499Y3 187 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 METTL11BQ5VVY1 283 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 GPR139Q6DWJ6 353 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 LEG1Q6P5S2 330 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 SEZ6L2Q6UXD5 910 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 OR6V1Q8N148 313 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 RELL2Q8NC24 303 aaPredicted RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 OR6K6Q8NGW6 343 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 SMAP2Q8WU79 429 aaPredicted RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 GIMAP1Q8WWP7 306 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 RND1Q92730 232 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 SLC25A38Q96DW6 304 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 S100A16Q96FQ6 103 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 SFXN2Q96NB2 322 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 TRIB1Q96RU8 372 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 PDCD1LG2Q9BQ51 273 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 C20orf85Q9H1P6 137 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 MRTO4Q9UKD2 239 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 TMEM14AQ9Y6G1 99 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 A6NIN4 97 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 WDR1O75083 606 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ZNF708P17019 499 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 PSMB1P20618 241 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 SLC6A8P48029 635 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ERVK-25P63136 954 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 EGR3Q06889 387 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 SKP2Q13309 424 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 CAMK2DQ13557 499 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 RAET1LQ5VY80 246 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 DNM1P46Q6ZS02 220 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms