RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 RPA2P15927 270 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ACHEP22303 614 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 RPS16P62249 146 aaKnown RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 TRMT12Q53H54 448 aaKnown RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 SLC17A4Q9Y2C5 497 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 MYO16Q9Y6X6 1858 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 HOXD13P35453 343 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF429Q86V71 674 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 GALMQ96C23 342 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 TAZQ16635 292 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 MED25Q71SY5 747 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 MRPS24Q96EL2 167 aaKnown RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 LCORQ96JN0 433 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 OR2J1Q9GZK6 312 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 CDCP1Q9H5V8 836 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 SCRG1O75711 98 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 MLF1P58340 268 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 DGAT2L7PQ6IED9 249 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 WRAP73Q9P2S5 460 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 RGPD8O14715 1765 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM129A0AVI4 362 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 H7C1C5 153 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 FCN1O00602 326 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 UTS2O95399 124 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 DAPP51397 102 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF343Q6P1L6 599 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 GALNT16Q8N428 558 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 FBXO27Q8NI29 283 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 ARRDC2Q8TBH0 407 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 FKBP11Q9NYL4 201 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 LRIT1Q9P2V4 623 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 ADRA1AP35348 466 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 RGRP47804 291 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 EGR3Q06889 387 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 BAP18Q8IXM2 172 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 SIAH2O43255 324 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 GYPAP02724 150 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 FAM87AP0C7U9 286 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 PIGPP57054 158 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 SMN1Q16637 294 aaKnown RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM131LA2VDJ0 1609 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 HOXC13P31276 330 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 SLC39A11Q8N1S5 342 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 OR4F17Q8NGA8 305 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 LILRB1Q8NHL6 650 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 GOT1L1Q8NHS2 421 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 DTD2Q96FN9 168 aa10.65□□□□□ -0.7
VPS13A-205ENST00000376636 DDX60Q8IY21 1712 aaKnown RBP10.65□□□□□ -0.7
VPS13A-205ENST00000376636 TTRP02766 147 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 HRH1P35367 487 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 CYB5R1Q9UHQ9 305 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 SCN1AP35498 2009 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM218A2RU14 115 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 RPLP1P05386 114 aaKnown RBP10.65□□□□□ -0.71
VPS13A-205ENST00000376636 FOXA1P55317 472 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 GNB2P62879 340 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 IL10RAQ13651 578 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 CLLU1Q5K131 121 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 C19orf47Q8N9M1 422 aaKnown RBP10.65□□□□□ -0.71
VPS13A-205ENST00000376636 TTC9Q92623 222 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF142P52746 1687 aaPredicted RBP10.65□□□□□ -0.71
VPS13A-205ENST00000376636 CMTM4Q8IZR5 234 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 QDPRP09417 244 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 NPWQ8N729 165 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 SPNS1Q9H2V7 528 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM38AQ9H6F2 299 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF785A8K8V0 405 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 PIPP12273 146 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 SRP9P49458 86 aaKnown RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM231Q9H6L2 316 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 F5H697 171 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 NEURL1O76050 574 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OPN1LWP04000 364 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CD99P14209 185 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MANEAQ5SRI9 462 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 FCRL6Q6DN72 434 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 LIPIQ6XZB0 460 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MAML2Q8IZL2 1156 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 HGDQ93099 445 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CDCA3Q99618 268 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 LANCL2Q9NS86 450 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR2A25A4D2G3 310 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TOMM34Q15785 309 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CTSFQ9UBX1 484 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CD200P41217 278 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 NEIL1Q96FI4 390 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MIEN1Q9BRT3 115 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 ADAT1Q9BUB4 502 aaKnown RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CHST8Q9H2A9 424 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TMED7Q9Y3B3 224 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms