RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TAF9Q16594 264 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 MRM1Q6IN84 353 aaKnown RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 CBLN3Q6UW01 205 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 UBE3DQ7Z6J8 389 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 OR10G3Q8NGC4 313 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 SEH1LQ96EE3 360 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 FAM212BQ9NTI7 297 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 SULT1C2O00338 296 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 NRASP01111 189 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 EDDM3AQ14507 147 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 RNLSQ5VYX0 342 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 TAS2R5Q9NYW4 299 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 TRAV1-2A0A0B4J238 106 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 NPIPB8E9PQR5 432 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 DSCR4P56555 118 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 SHEQ5VZ18 495 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 LAIR1Q6GTX8 287 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 CD300LDQ6UXZ3 194 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 C16orf47Q6ZP98 133 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 CREB3L2Q70SY1 520 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
C9orf47-203ENST00000375851 TAAR9Q96RI9 348 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 HAO2Q9NYQ3 351 aa12.3□□□□□ -0.44
C9orf47-203ENST00000375851 IGHV3-64DA0A0J9YX35 117 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 HS3ST1O14792 307 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 IL9P15248 144 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 RPA2P15927 270 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 MPLP40238 635 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 DYRK1AQ13627 763 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 AADACL4Q5VUY2 407 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 C8orf82Q6P1X6 216 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 PLXDC2Q6UX71 529 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CARFQ8N187 725 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 C10orf111Q8N326 155 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SUMF1Q8NBK3 374 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 INTS12Q96CB8 462 aaKnown RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 GNRHR2Q96P88 292 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 TOR1AO14656 332 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 C1QBP02746 253 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CDAP32320 146 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF121P58317 390 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 S100A12P80511 92 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 DMRTC1Q5HYR2 192 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 OR2I1PQ8NGU4 316 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 OR2V1Q8NHB1 315 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 ANKRD9Q96BM1 317 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 PELI1Q96FA3 418 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SAV1Q9H4B6 383 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 A0A1W2PPV9 198 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CDC42EP2O14613 210 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SPINT1O43278 529 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 LILRB5O75023 590 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CRYZL1O95825 349 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 OPRM1P35372 400 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SLC25A1P53007 311 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 RAB4BP61018 213 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CLINT1Q14677 625 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 TOMM34Q15785 309 aaPredicted RBP12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CNTNAP3Q9BZ76 1288 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 CACNA1IQ9P0X4 2223 aa12.29□□□□□ -0.44
C9orf47-203ENST00000375851 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 CD3DP04234 171 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 PRKACAP17612 351 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 ARR3P36575 388 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 EIF2S3LQ2VIR3 472 aaKnown RBP12.28□□□□□ -0.44
C9orf47-203ENST00000375851 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 HSD17B11Q8NBQ5 300 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 UFSP2Q9NUQ7 469 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 P4HTMQ9NXG6 502 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 ZNF732B4DXR9 585 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 CLDN1O95832 211 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 IL2RAP01589 272 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 GABRB1P18505 474 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 NME2P22392 152 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 OR8B8Q15620 311 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 SLC38A9Q8NBW4 561 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 RDH5Q92781 318 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 S100PBPQ96BU1 408 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 SPINT2O43291 252 aa12.28□□□□□ -0.44
C9orf47-203ENST00000375851 TFF2Q03403 129 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms