RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 OR52E2Q8NGJ4 325 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 ZNF420Q8TAQ5 688 aaPredicted RBP11.97□□□□□ -0.49
NELFE-201ENST00000375425 GNPDA2Q8TDQ7 276 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 FAM216AQ8WUB2 273 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 MEGF10Q96KG7 1140 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 JMJD8Q96S16 334 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 PITX2Q99697 317 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 SLC6A7Q99884 636 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 SUCNR1Q9BXA5 334 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 CYB5R1Q9UHQ9 305 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 DYSFO75923 2080 aa11.97□□□□□ -0.49
NELFE-201ENST00000375425 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 F5H5K5 113 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 TRIM77I1YAP6 450 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 HLA-DQA2P01906 255 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.49
NELFE-201ENST00000375425 MMP16P51512 607 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 SEC61A1P61619 476 aaKnown RBP11.96□□□□□ -0.49
NELFE-201ENST00000375425 ACTG1P63261 375 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 TSPAN31Q12999 210 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 SLC36A3Q495N2 470 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 SLC18B1Q6NT16 456 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 PGBD2Q6P3X8 592 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 ZNF620Q6ZNG0 422 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 PIGWQ7Z7B1 504 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 NAA40Q86UY6 237 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 DEFB107AQ8IZN7 70 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 BHLHE23Q8NDY6 225 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 DEFB108BQ8NET1 73 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 SDR9C7Q8NEX9 313 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 OR2AJ1Q8NGZ0 328 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 SLC30A2Q9BRI3 323 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 C1QTNF5Q9BXJ0 243 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 FN3KQ9H479 309 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 TMEM100Q9NV29 134 aa11.96□□□□□ -0.49
NELFE-201ENST00000375425 POLR3KQ9Y2Y1 108 aaPredicted RBP11.96□□□□□ -0.49
NELFE-201ENST00000375425 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 MLNRO43193 412 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 KRT36O76013 467 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 ZNF205O95201 554 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 FSHBP01225 129 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 ACSM4P0C7M7 580 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 FPR2P25090 351 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 CFPP27918 469 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 GGT2P36268 569 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
NELFE-201ENST00000375425 HMGA2P52926 109 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 PRSS12P56730 875 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.95□□□□□ -0.5
NELFE-201ENST00000375425 ECH1Q13011 328 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 ZNF154Q13106 437 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 CLEC12AQ5QGZ9 265 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 GCDHQ92947 438 aaPredicted RBP11.95□□□□□ -0.5
NELFE-201ENST00000375425 ATF6BQ99941 703 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 EGLN3Q9H6Z9 239 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 TMEM165Q9HC07 324 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 ARL2BPQ9Y2Y0 163 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 AUP1Q9Y679 476 aa11.95□□□□□ -0.5
NELFE-201ENST00000375425 CEACAM18A8MTB9 384 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 F5H5P2 479 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 IFNL4K9M1U5 179 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 CYB5R3P00387 301 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 LCATP04180 440 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 HLA-DPB1P04440 258 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 WNT2P09544 360 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 SELEP16581 610 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 ZNF12P17014 697 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 GNGT1P63211 74 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 MXRA7P84157 204 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 MOGAT3Q86VF5 341 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 DVL3Q92997 716 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 SLCO4A1Q96BD0 722 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 BTBD10Q9BSF8 475 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 ESM1Q9NQ30 184 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 MRPL22Q9NWU5 206 aaKnown RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 NDE1Q9NXR1 346 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 GASTP01350 101 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 ZNF823P16415 610 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 PMELP40967 661 aa11.94□□□□□ -0.5
NELFE-201ENST00000375425 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
NELFE-201ENST00000375425 MALLQ13021 153 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms