RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 C7orf34Q96L11 122 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 ERMAPQ96PL5 475 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-202ENST00000373556 COQ7Q99807 217 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 SSBP3Q9BWW4 388 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-202ENST00000373556 TMEM165Q9HC07 324 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.25
HDAC8-202ENST00000373556 ZNF446Q9NWS9 450 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 ABCD2Q9UBJ2 740 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 V9GYQ6 96 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 TRRAPQ9Y4A5 3859 aa13.52□□□□□ -0.25
HDAC8-202ENST00000373556 IGLV1-36A0A0B4J1U3 117 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 HLA-DPB1P04440 258 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 CRABP1P29762 137 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 SRP9P49458 86 aaKnown RBP13.51□□□□□ -0.25
HDAC8-202ENST00000373556 PAX2Q02962 417 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 PAX8Q06710 450 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 RSPO1Q2MKA7 263 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-202ENST00000373556 FAM201AQ5SY85 155 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 GLYATQ6IB77 296 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 LEG1Q6P5S2 330 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 DNM1P34Q6PK57 102 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 KLBQ86Z14 1044 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 LINC00346Q8IVM7 164 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 FANK1Q8TC84 345 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC8-202ENST00000373556 NMNAT3Q96T66 252 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 TMEM246Q9BRR3 403 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 FUZQ9BT04 418 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 ZNF747Q9BV97 191 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 MS4A7Q9GZW8 240 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-202ENST00000373556 HDHD2Q9H0R4 259 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 KRCC1Q9NPI7 259 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-202ENST00000373556 B9D1Q9UPM9 204 aa13.51□□□□□ -0.25
HDAC8-202ENST00000373556 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 IFNL4K9M1U5 179 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 NDUFAB1O14561 156 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 TMPRSS2O15393 492 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 PMELP40967 661 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 GNB2P62879 340 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 COX10Q12887 443 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 KRT72Q14CN4 511 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 CFAP77Q6ZQR2 320 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 OR6V1Q8N148 313 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 DHRS1Q96LJ7 313 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 FN3KQ9H479 309 aa13.5□□□□□ -0.25
HDAC8-202ENST00000373556 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
HDAC8-202ENST00000373556 SAMD4AQ9UPU9 718 aaKnown RBP13.5□□□□□ -0.25
HDAC8-202ENST00000373556 IGHV2-70DA0A0C4DH43 119 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 HIST1H1CP16403 213 aaKnown RBP13.49□□□□□ -0.25
HDAC8-202ENST00000373556 FPR3P25089 353 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 PGM2L1Q6PCE3 622 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 BTNL3Q6UXE8 466 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 NAA40Q86UY6 237 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 SLC26A10Q8NG04 563 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 OR4K13Q8NH42 304 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 NEIL1Q96FI4 390 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-202ENST00000373556 IFT27Q9BW83 186 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 HCAR1Q9BXC0 346 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 OR52D1Q9H346 318 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 ZMAT3Q9HA38 289 aaKnown RBP13.49□□□□□ -0.25
HDAC8-202ENST00000373556 RPRD1BQ9NQG5 326 aaKnown RBP13.49□□□□□ -0.25
HDAC8-202ENST00000373556 TMEM100Q9NV29 134 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 ADA2Q9NZK5 511 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 MIOXQ9UGB7 285 aa13.49□□□□□ -0.25
HDAC8-202ENST00000373556 TRAV40A0A0B4J280 105 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 F5H5K5 113 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 RENP00797 406 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 RNASE1P07998 156 aaKnown RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 ACSM4P0C7M7 580 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SLC6A6P31641 620 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 MDH1P40925 334 aaKnown RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SPIBQ01892 262 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 GK2Q14410 553 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SLC9A3R2Q15599 337 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 RFX4Q33E94 735 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 KRTAP27-1Q3LI81 207 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SLC18B1Q6NT16 456 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 LYPD2Q6UXB3 125 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 COLCA1Q6ZS62 124 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 RAB40AQ8WXH6 277 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SLC25A28Q96A46 364 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 PITX2Q99697 317 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 UNKLQ9H9P5 680 aaKnown RBP13.48□□□□□ -0.25
HDAC8-202ENST00000373556 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
HDAC8-202ENST00000373556 GADD45GO95257 159 aa13.47□□□□□ -0.25
HDAC8-202ENST00000373556 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
HDAC8-202ENST00000373556 PITPNBP48739 271 aa13.47□□□□□ -0.25
HDAC8-202ENST00000373556 TRAP1Q12931 704 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms