RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 ATOH1Q92858 354 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 SPACA5Q96QH8 159 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ZNF2Q9BSG1 426 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 SPNS1Q9H2V7 528 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 TRAV1-2A0A0B4J238 106 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 A0A1W2PNR3 127 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ZNF724A8MTY0 619 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ATP6V1G2-DDX39BF2Z307 99 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 NRG2O14511 850 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ADRB1P08588 477 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 OR13C7P0DN81 318 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 TBXA2RP21731 343 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 FGF9P31371 208 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 KCNAB1Q14722 419 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 GCNT2Q8N0V5 402 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ST8SIA4Q92187 359 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 TSLPQ969D9 159 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 S1PR5Q9H228 398 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
PTPRF-203ENST00000372407 SLC6A13Q9NSD5 602 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 MCM3APO60318 1980 aa10.38□□□□□ -0.75
PTPRF-203ENST00000372407 LGALS8O00214 317 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 PPM1DO15297 605 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 OR4E1P0C645 316 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 EDN3P14138 238 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 SSTP61278 116 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 IL10RAQ13651 578 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 EXOSC2Q13868 293 aaKnown RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 HABP2Q14520 560 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 MRGPRX1Q96LB2 322 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 DERL3Q96Q80 235 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 PARP12Q9H0J9 701 aaKnown RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 MED29Q9NX70 200 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 KCNG2Q9UJ96 466 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 FBXL4Q9UKA2 621 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 TIMM10BQ9Y5J6 103 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 MN1Q10571 1320 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 OR6C76A6NM76 312 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ZNF354AO60765 605 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 IGHV3-9P01782 118 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 DCTDP32321 178 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 KIR2DL3P43628 341 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 CCR5P51681 352 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 AGERQ15109 404 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 PXDC1Q5TGL8 231 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 C12orf73Q69YU5 71 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 FAAP20Q6NZ36 180 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 RBMXL3Q8N7X1 1067 aaKnown RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 CYSLTR2Q9NS75 346 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 OR51B4Q9Y5P0 310 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 R4GMQ9 66 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 CAPZBP47756 277 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 TAF9Q16594 264 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 BAGE2Q86Y30 109 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 BSCL2Q96G97 398 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ADAM19Q9H013 955 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 RNF32Q9H0A6 362 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ERVMER34-1Q9H9K5 563 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 PLEKHA2Q9HB19 425 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ASPDHA6ND91 283 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ADAM10O14672 748 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ICOSLGO75144 302 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 GRPP07492 148 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 FCGR2CP31995 323 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 OPRM1P35372 400 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 CLN3Q13286 438 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 EDDM3AQ14507 147 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 TBC1D28Q2M2D7 210 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 MSRB3Q8IXL7 192 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ANKRD53Q8N9V6 530 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 ATF6BQ99941 703 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 TEX101Q9BY14 249 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 A4GNTQ9UNA3 340 aa10.37□□□□□ -0.75
PTPRF-203ENST00000372407 H7BYZ3 331 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 AKR7A2O43488 359 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 GLAP06280 429 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 CTSLP07711 333 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 PPP2CBP62714 309 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 PPP2CAP67775 309 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 PRSS36Q5K4E3 855 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 YRDCQ86U90 279 aaKnown RBP10.36□□□□□ -0.75
PTPRF-203ENST00000372407 OR5M1Q8NGP8 315 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 NEURL2Q9BR09 285 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 FAM234AQ9H0X4 552 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 AUNIPQ9H7T9 357 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 LANCL2Q9NS86 450 aa10.36□□□□□ -0.75
PTPRF-203ENST00000372407 SIRT5Q9NXA8 310 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms