RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SLC22A12Q96S37 553 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 NPY6RQ99463 290 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 ACSM6Q6P461 480 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 HTR6P50406 440 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 SPRED1Q7Z699 444 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 UCN3Q969E3 161 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 PIGTQ969N2 578 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 STARD4Q96DR4 205 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 ZIC5Q96T25 663 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 SPO11Q9Y5K1 396 aa14.04□□□□□ -0.16
GTF3C4-201ENST00000372146 LEFTY2O00292 366 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 FAM87AP0C7U9 286 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ABCD3P28288 659 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ERHP84090 104 aaKnown RBP14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 PMP22Q01453 160 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ZNF595Q8IYB9 648 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ACOT4Q8N9L9 421 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 SMIM18P0DKX4 95 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 FABP2P12104 132 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 OR8G1Q15617 311 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 MBTPS2O43462 519 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 OR10J1P30954 320 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 FITM1A5D6W6 292 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 CLDN17P56750 224 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 TMEM267Q0VDI3 215 aaPredicted RBP14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 PJVKQ0ZLH3 352 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 PM20D1Q6GTS8 502 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 FIGLAQ6QHK4 219 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 TAS2R4Q9NYW5 299 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 H7C2G1 150 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ZNF195O14628 629 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 SPINT3P49223 89 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 SNRPGP15A8MWD9 76 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 CALCBP10092 127 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 COL9A3Q14050 684 aaPredicted RBP14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ZNF343Q6P1L6 599 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 TSEN54Q7Z6J9 526 aaKnown RBP14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 LYG2Q86SG7 212 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ADGRL4Q9HBW9 690 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 ELNP15502 786 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 CEBPBP17676 345 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 GDF1P27539 372 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 LPAR4Q99677 370 aa14.03□□□□□ -0.16
GTF3C4-201ENST00000372146 GAGE10A6NGK3 116 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 ZNF140P52738 457 aaPredicted RBP14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 MYPOPQ86VE0 399 aaPredicted RBP14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 OR8D4Q8NGM9 314 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 SPACA9Q96E40 222 aaPredicted RBP14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 CHST8Q9H2A9 424 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 NKX6-3A6NJ46 265 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 DNPH1O43598 174 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 AGBL4Q5VU57 503 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 RHOVQ96L33 236 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 NTPCRQ9BSD7 190 aaKnown RBP14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 CHST6Q9GZX3 395 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 PITPNC1Q9UKF7 332 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 DPPA3Q6W0C5 159 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 OR4A4PQ8NGN8 299 aa14.02□□□□□ -0.16
GTF3C4-201ENST00000372146 CGB2Q6NT52 195 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 C12orf42Q96LP6 360 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 NAGKQ9UJ70 344 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 MYO7BQ6PIF6 2116 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 GRPP07492 148 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 FBP1P09467 338 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 CHRNA7P36544 502 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 CLPPQ16740 277 aaPredicted RBP14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 RNF2Q99496 336 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 SEC11CQ9BY50 192 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 CLEC18AA5D8T8 446 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 M0R3E3 92 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 COMPP49747 757 aaPredicted RBP14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 LMAN2Q12907 356 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 CLEC18CQ8NCF0 446 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 SLC26A10Q8NG04 563 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 RSG1Q9BU20 258 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 TXLNGYQ9BZA5 131 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 MRPL37Q9BZE1 423 aaKnown RBP14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 COCHO43405 550 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 RNASE1P07998 156 aaKnown RBP14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 GALNT16Q8N428 558 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 RAB7BQ96AH8 199 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 AAMDCQ9H7C9 122 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 USP22Q9UPT9 525 aa14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 RCL1Q9Y2P8 373 aaKnown RBP14.02□□□□□ -0.17
GTF3C4-201ENST00000372146 TRBV11-1A0A0K0K1C0 115 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 NPIPB15A6NHN6 443 aaPredicted RBP14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 LRRC30A6NM36 301 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 ZNF542PQ5EBM4 170 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 LHX3Q9UBR4 397 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 TMEM184BQ9Y519 407 aaPredicted RBP14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 SOX15O60248 233 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 MRPL33O75394 65 aaKnown RBP14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 PRSS1P07477 247 aa14.01□□□□□ -0.17
GTF3C4-201ENST00000372146 PCBP3P57721 371 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms