RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 RPL27P61353 136 aaKnown RBP12.96□□□□□ -0.33
RPF1-202ENST00000370656 POU3F1Q03052 451 aaPredicted RBP12.96□□□□□ -0.33
RPF1-202ENST00000370656 PUDPQ08623 228 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 ADCK1Q86TW2 530 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 IGFN1Q86VF2 1251 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 CCDC36Q8IYA8 594 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 PROKR2Q8NFJ6 384 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 TMIGD2Q96BF3 282 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
RPF1-202ENST00000370656 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 TSPAN32Q96QS1 320 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 ZNF649Q9BS31 505 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 MS4A5Q9H3V2 200 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 SEC14L4Q9UDX3 406 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 RASD1Q9Y272 281 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 CMAHPQ9Y471 501 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 SPEF1Q9Y4P9 236 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.33
RPF1-202ENST00000370656 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 OR6C68A6NDL8 312 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 FAM183AA6NL82 134 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 ZNF701M0R085 212 aaPredicted RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 OR6A2O95222 327 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 FADS2O95864 444 aaKnown RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 TFP02787 698 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 F13BP05160 661 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 MSMBP08118 114 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 ROR2Q01974 943 aaKnown RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 SNTB2Q13425 540 aaKnown RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 RAB39AQ14964 217 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 MESTQ5EB52 335 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 FAM205BPQ63HN1 556 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 USP43Q70EL4 1123 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 PEG10Q86TG7 708 aaKnown RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 OR4K13Q8NH42 304 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 RACGAP1Q9H0H5 632 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 TPK1Q9H3S4 243 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 SEC61A2Q9H9S3 476 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 VSX1Q9NZR4 365 aaPredicted RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 GRHPRQ9UBQ7 328 aa12.95□□□□□ -0.34
RPF1-202ENST00000370656 LSM2Q9Y333 95 aaKnown RBP12.95□□□□□ -0.34
RPF1-202ENST00000370656 TEX13CA0A0J9YWL9 993 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 M0R233 179 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 RNF13O43567 381 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 SYNGR3O43761 229 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 UPK3AO75631 287 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 RAB36O95755 333 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 CELA3BP08861 270 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 MAP2K4P45985 399 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 CAPZA2P47755 286 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 EVX1P49640 407 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 GP2P55259 537 aaKnown RBP12.94□□□□□ -0.34
RPF1-202ENST00000370656 HILS1P60008 231 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
RPF1-202ENST00000370656 POU4F2Q12837 409 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 KRR1Q13601 381 aaKnown RBP12.94□□□□□ -0.34
RPF1-202ENST00000370656 LINC01590Q5TEZ4 76 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 ZBTB46Q86UZ6 589 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 EGFL6Q8IUX8 553 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 NANOGP1Q8N7R0 232 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 CYB561A3Q8NBI2 242 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 ZNF485Q8NCK3 441 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 RORBQ92753 470 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 RASD2Q96D21 266 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 COG8Q96MW5 612 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 CCDC90BQ9GZT6 254 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 NELFAQ9H3P2 528 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 MED20Q9H944 212 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 CRLF2Q9HC73 371 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
RPF1-202ENST00000370656 NOX1Q9Y5S8 564 aa12.94□□□□□ -0.34
RPF1-202ENST00000370656 A0A1W2PRG6 482 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 A6NIZ1 184 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 H3BSA7 217 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 SLC43A1O75387 559 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
RPF1-202ENST00000370656 GLCEO94923 617 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 INMTO95050 263 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 ZNF43P17038 809 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 SPI1P17947 270 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 ACHEP22303 614 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 GTF2E2P29084 291 aaKnown RBP12.93□□□□□ -0.34
RPF1-202ENST00000370656 CENPAP49450 140 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 RAP1BP61224 184 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 RAP1AP62834 184 aa12.93□□□□□ -0.34
RPF1-202ENST00000370656 NEDD8Q15843 81 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms