RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PRSS45Q7RTY3 260 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 BTLAQ7Z6A9 289 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 DOLPP1Q86YN1 238 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 NAXEQ8NCW5 288 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 OR51A4Q8NGJ6 313 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 OR1F12Q8NHA8 337 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 STARD4Q96DR4 205 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 BRD7Q9NPI1 651 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 A3GALT2U3KPV4 340 aa20.88■□□□□ 0.93
SNX3-203ENST00000368979 ARPC4-TTLL3A0A0A6YYG9 625 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 SLC19A2O60779 497 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 IL2RAP01589 272 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 OCM2P0CE71 109 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 UBCP0CG48 685 aaKnown RBP20.87■□□□□ 0.93
SNX3-203ENST00000368979 ACHEP22303 614 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 MYL9P24844 172 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 MAPK3P27361 379 aaPredicted RBP20.87■□□□□ 0.93
SNX3-203ENST00000368979 CEACAM8P31997 349 aaPredicted RBP20.87■□□□□ 0.93
SNX3-203ENST00000368979 RORCP51449 518 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 GALK2Q01415 458 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 ST3GAL2Q16842 350 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 ZNF404Q494X3 552 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 AKR7LQ8NHP1 331 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 BCL2L2Q92843 193 aaPredicted RBP20.87■□□□□ 0.93
SNX3-203ENST00000368979 NOX4Q9NPH5 578 aa20.87■□□□□ 0.93
SNX3-203ENST00000368979 TRBV5-7A0A0A0MS05 114 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 TRAV1-2A0A0B4J238 106 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 A0A1W2PPK0 400 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 EDN3P14138 238 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 HSD17B12Q53GQ0 312 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 TMEM244Q5VVB8 128 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 SLC7A6Q92536 515 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 THRSPQ92748 146 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 SPTSSAQ969W0 71 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 TPK1Q9H3S4 243 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 SLC17A5Q9NRA2 495 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 ATPIF1Q9UII2 106 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 PROCRQ9UNN8 238 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 BOD1L1Q8NFC6 3051 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 GTF3C1Q12789 2109 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 CACNA1CQ13936 2221 aa20.86■□□□□ 0.93
SNX3-203ENST00000368979 LOC107986453A0A1B0GWG9 222 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 ZNF503-AS2A6NEH8 195 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 F5H5K5 113 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 M0R135 149 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 APOC1P02654 83 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 DBHP09172 617 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 ACSM4P0C7M7 580 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 GLI4P10075 376 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 SLC2A1P11166 492 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 COX5AP20674 150 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 ANOS1P23352 680 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 SOX2P48431 317 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 HNRNPA0Q13151 305 aaKnown RBP20.85■□□□□ 0.93
SNX3-203ENST00000368979 PABPC1L2AQ5JQF8 200 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 C3P1Q6ZMU1 363 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 DPPA2Q7Z7J5 298 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 TPRA1Q86W33 373 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 OR8B12Q8NGG6 310 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 MCFD2Q8NI22 146 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 ZNF799Q96GE5 643 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 CXorf56Q9H5V9 222 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 SLC24A3Q9HC58 644 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 HHLA2Q9UM44 414 aa20.85■□□□□ 0.93
SNX3-203ENST00000368979 USP24Q9UPU5 2620 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 HLA-HP01893 362 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 RAF1P04049 648 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 HTR5AP47898 357 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 TBRG1Q3YBR2 411 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 HIKESHIQ53FT3 197 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 LINC00299Q6ZSB3 139 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 GABRG1Q8N1C3 465 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 TSEN15Q8WW01 171 aaKnown RBP20.84■□□□□ 0.93
SNX3-203ENST00000368979 MMP27Q9H306 513 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 RNF121Q9H920 327 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 NOX3Q9HBY0 568 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 ZNF319Q9P2F9 582 aa20.84■□□□□ 0.93
SNX3-203ENST00000368979 SMIM30A4D0T7 59 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 TTLL8A6PVC2 850 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 H3BSH0 61 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 P2RY10O00398 339 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 UBL3O95164 117 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 ANXA2P07355 339 aaKnown RBP20.83■□□□□ 0.93
SNX3-203ENST00000368979 TGFBR3Q03167 851 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 RBPJQ06330 500 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 SFRP5Q5T4F7 317 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 DRAM2Q6UX65 266 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 FAM57BQ71RH2 274 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 NAA40Q86UY6 237 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 NR2C2APQ86WQ0 139 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 ASB5Q8WWX0 329 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 TMEM106AQ96A25 262 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 ORAI1Q96D31 301 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 BOD1Q96IK1 185 aa20.83■□□□□ 0.93
SNX3-203ENST00000368979 PLEKHB1Q9UF11 243 aaPredicted RBP20.83■□□□□ 0.93
SNX3-203ENST00000368979 A0A075B6Q4 140 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 ERVH48-1M5A8F1 160 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 ARR3P36575 388 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 TPTEP56180 551 aa20.83■□□□□ 0.92
SNX3-203ENST00000368979 CAV3P56539 151 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms