RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 MAP6Q96JE9 813 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 CTSFQ9UBX1 484 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 YBX2Q9Y2T7 364 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 LGALS8O00214 317 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 SGCEO43556 437 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 OR2J2O76002 312 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 CD63P08962 238 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 ICAM2P13598 275 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 PSMB6P28072 239 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 SSBP1Q04837 148 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 RPS19BP1Q86WX3 136 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 OR1N1Q8NGS0 311 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 HLA-CQ95604 372 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 GDF2Q9UK05 429 aaPredicted RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 MAP1BP46821 2468 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 PDCD11Q14690 1871 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 ELFN2Q5R3F8 820 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 CDH26Q8IXH8 852 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 TEX19Q8NA77 164 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 FAM213BQ8TBF2 198 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 SLC25A32Q9H2D1 315 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 LHX9Q9NQ69 397 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 KIF25Q9UIL4 384 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 DSPPQ9NZW4 1301 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 ARID1AO14497 2285 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 ATP6V1G2-DDX39BF2Z307 99 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 OGG1O15527 345 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 SLC34A2O95436 690 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 MECP2P51608 486 aaKnown RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 FMODQ06828 376 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 USF2Q15853 346 aaPredicted RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPA-202ENST00000368069 DMRTC1Q5HYR2 192 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 TMEM229BQ8NBD8 167 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 TCTEX1D2Q8WW35 142 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 PFDN5Q99471 154 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 PHF7Q9BWX1 381 aaPredicted RBP10.54□□□□□ -0.72
COPA-202ENST00000368069 NECAP2Q9NVZ3 263 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 MTFP1Q9UDX5 166 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 FBXO4Q9UKT5 387 aa10.54□□□□□ -0.72
COPA-202ENST00000368069 SEC16AO15027 2179 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 PSME4Q14997 1843 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 SHISA8B8ZZ34 492 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 POU2F2P09086 479 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 GLB1P16278 677 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 CNR1P21554 472 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 IL32P24001 234 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 FUT5Q11128 374 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 LANCL3Q6ZV70 420 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 C11orf40Q8WZ69 217 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 MRGPRX4Q96LA9 322 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 HRKO00198 91 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 CYR61O00622 381 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 GUSBP08236 651 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 SRFP11831 508 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
COPA-202ENST00000368069 BAMBIQ13145 260 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 CLINT1Q14677 625 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 EXT1Q16394 746 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 PPP1R1CQ8WVI7 109 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 VSTM2LQ96N03 204 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 HINT2Q9BX68 163 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 FANCFQ9NPI8 374 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 MRM2Q9UI43 246 aaKnown RBP10.53□□□□□ -0.72
COPA-202ENST00000368069 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 METTL12A8MUP2 240 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 LANCL1O43813 399 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 ABHD16AO95870 558 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 ERGP11308 486 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 ECI1P42126 302 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 S100A12P80511 92 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 PCK2Q16822 640 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 DCAF12Q5T6F0 453 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 H3F3CQ6NXT2 135 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 EXD3Q8N9H8 876 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 ZBTB44Q8NCP5 570 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 TMEM52Q8NDY8 209 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 LIPHQ8WWY8 451 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 ST8SIA2Q92186 375 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
COPA-202ENST00000368069 MYOFQ9NZM1 2061 aa10.53□□□□□ -0.72
COPA-202ENST00000368069 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 ANKUB1A6NFN9 424 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 TUBAL3A6NHL2 446 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 GPR137BO60478 399 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 GMDSO60547 372 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 CTAG2O75638 210 aa10.52□□□□□ -0.72
COPA-202ENST00000368069 RAB11FIP2Q7L804 512 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms