RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TRMT61AQ96FX7 289 aaKnown RBP14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 CHRDL1Q9BU40 450 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 P2RX3P56373 397 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 LIPNQ5VXI9 398 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 CORO6Q6QEF8 472 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 RNF32Q9H0A6 362 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 DBX1A6NMT0 343 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 PIAS2O75928 621 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 AKR1C3P42330 323 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 BTG2P78543 158 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 ELFN2Q5R3F8 820 aa14.27□□□□□ -0.13
NUCKS1-201ENST00000367142 FITM1A5D6W6 292 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 SPRY3O43610 288 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 ARRB2P32121 409 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PPP2CBP62714 309 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PPP2CAP67775 309 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 ZNF766Q5HY98 468 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 TRNP1Q6NT89 227 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 OR4F5Q8NH21 305 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 OR4F4Q96R69 305 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 SSSCA1O60232 199 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 GPX2P18283 190 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 HOXC8P31273 242 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 SUMO3P55854 103 aaPredicted RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 HDGFL3Q9Y3E1 203 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 TRGV5A0A0B4J1U4 118 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 OR6C68A6NDL8 312 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 MAGEB4O15481 346 aaPredicted RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 FABP7O15540 132 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 SYT6Q5T7P8 510 aaPredicted RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 RPL3LQ92901 407 aaKnown RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 R4GMQ9 66 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 ZNF724A8MTY0 619 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 HMGN4O00479 90 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 CASP3P42574 277 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 BTN1A1Q13410 526 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PCK2Q16822 640 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PLAC9Q5JTB6 97 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 TVP23CQ96ET8 276 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PELI1Q96FA3 418 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PBOV1Q9GZY1 135 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 RPL18Q07020 188 aaKnown RBP14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 CLCF1Q9UBD9 225 aa14.26□□□□□ -0.13
NUCKS1-201ENST00000367142 PRSS37A4D1T9 235 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SBK2P0C263 348 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC25A6P12236 298 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 B4GALT1P15291 398 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 HIST1H1CP16403 213 aaKnown RBP14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 PPP1CAP62136 330 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 Q56UQ5 140 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 DDOQ99489 341 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 ATP6V1G2-DDX39BF2Z307 99 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 APEX1P27695 318 aaKnown RBP14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 TMUB2Q71RG4 321 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 OR5M9Q8NGP3 310 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC7A6Q92536 515 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SYT11Q9BT88 431 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 FAM90A27PA6NNH2 459 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 S100A4P26447 101 aaKnown RBP14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SLC36A1Q7Z2H8 476 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 TXNIPQ9H3M7 391 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 COL16A1Q07092 1604 aaPredicted RBP14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 A0A087WV62 115 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 TRA2AQ13595 282 aaKnown RBP eCLIP14.25□□□□□ -0.138e-10■■■■□ 23.3
NUCKS1-201ENST00000367142 ARHGEF39Q8N4T4 335 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 KCNRGQ8N5I3 272 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 MARC2Q969Z3 335 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 GALMQ96C23 342 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 POM121L2Q96KW2 1035 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 YTHDF2Q9Y5A9 579 aaKnown RBP14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 KPTNQ9Y664 436 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 HNF1AP20823 631 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 SPEM2Q0P670 501 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 C16orf52Q8NHV5 167 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 PRRX2Q99811 253 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 PSENENQ9NZ42 101 aa14.25□□□□□ -0.13
NUCKS1-201ENST00000367142 ANKUB1A6NFN9 424 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 SULT1C4O75897 302 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 SYT14P1Q58G82 188 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 TTC9Q92623 222 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 NDUFB11Q9NX14 153 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 PPP5D1E7EU14 171 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 PPP1R2P9O14990 202 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 FCN2Q15485 313 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 TMEM268Q5VZI3 342 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 NANOGP1Q8N7R0 232 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 GPX8Q8TED1 209 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 APOBEC3DQ96AK3 386 aaPredicted RBP14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 ESRP2Q9H6T0 727 aaKnown RBP14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 CCSO14618 274 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 OR2J3O76001 311 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 IAPPP10997 89 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 COX5AP20674 150 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 GCAP28676 217 aa14.24□□□□□ -0.13
NUCKS1-201ENST00000367142 Q1RN00 199 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms