RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SOX15O60248 233 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 THRAP10827 490 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 ZNF708P17019 499 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 CCND2P30279 289 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 DUSP3P51452 185 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 TMEM41BQ5BJD5 291 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 BLOC1S2Q6QNY1 142 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 COMTD1Q86VU5 262 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 CSGALNACT2Q8N6G5 542 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 TRPV1Q8NER1 839 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR1L1Q8NH94 360 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 STMN2Q93045 179 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 KIR3DX1Q9H7L2 352 aa-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 CSDC2Q9Y534 153 aaKnown RBP-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 MDC1Q14676 2089 aaKnown RBP-0.43□□□□□ -2.48
RNU6-238P-201ENST00000363313 DYSFO75923 2080 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 CRB1P82279 1406 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 NDUFC2-KCTD14E9PQ53 114 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 LANCL1O43813 399 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 TGFAP01135 160 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 CD37P11049 281 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 HLA-DPA1P20036 260 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR1G1P47890 313 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR12D2P58182 307 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 NKAIN4Q8IVV8 208 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 SPC24Q8NBT2 197 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR8K1Q8NGG5 319 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 TRMT10AQ8TBZ6 339 aaKnown RBP-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 MRPL32Q9BYC8 188 aaKnown RBP-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 ST3GAL6Q9Y274 331 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 SLC22A7Q9Y694 548 aa-0.44□□□□□ -2.48
RNU6-238P-201ENST00000363313 BAZ1BQ9UIG0 1483 aaKnown RBP-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 IGKV1-8A0A0C4DH67 115 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 CENPBD1B2RD01 187 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 F6UB75 175 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 MT-ND4P03905 459 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 PRR3P79522 188 aaKnown RBP-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 RCAN2Q14206 197 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 PDK1Q15118 436 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 TSC22D1Q15714 1073 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 PYHIN1Q6K0P9 492 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 C16orf87Q6PH81 154 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 CPNE9Q8IYJ1 553 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 MRPL38Q96DV4 380 aaKnown RBP-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 SLC25A44Q96H78 314 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 NAA38Q9BRA0 125 aaKnown RBP-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 PIPOXQ9P0Z9 390 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 MEMO1Q9Y316 297 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 LOXHD1Q8IVV2 1947 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 MPDZO75970 2070 aa-0.45□□□□□ -2.48
RNU6-238P-201ENST00000363313 IGLV1-36A0A0B4J1U3 117 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 RGSL1A5PLK6 1076 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 CDC40O60508 579 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 DPM1O60762 260 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 IGHV3-53P01767 116 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 KRT8P05787 483 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 ERGP11308 486 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 LAP3P28838 519 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 LIN9Q5TKA1 542 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 FA2HQ7L5A8 372 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 CENPLQ8N0S6 344 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 C19orf18Q8NEA5 215 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 NUDT9Q9BW91 350 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 CYSTM1Q9H1C7 97 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 VSIRQ9H7M9 311 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 KCNJ16Q9NPI9 418 aa-0.46□□□□□ -2.48
RNU6-238P-201ENST00000363313 COL7A1Q02388 2944 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 A0A1B0GVL5 298 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TRIM64A6NGJ6 449 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TRIM64BA6NI03 449 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TM7SF2O76062 418 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 HOXB8P17481 243 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 MAPK3P27361 379 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 RBM34P42696 430 aaKnown RBP-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 PRMT2P55345 433 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 ILKQ13418 452 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 SELPLGQ14242 412 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 ORMDL3Q8N138 153 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 ZFP41Q8N8Y5 198 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR8K3Q8NH51 312 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TBRG4Q969Z0 631 aaKnown RBP eCLIP-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 C4orf36Q96KX1 117 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 PARD6BQ9BYG5 372 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TMEM27Q9HBJ8 222 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 ZNF160Q9HCG1 818 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 DYRK4Q9NR20 520 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 TAS2R5Q9NYW4 299 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 CLN8Q9UBY8 286 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 AURKCQ9UQB9 309 aa-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-238P-201ENST00000363313 LAMB4A4D0S4 1761 aa-0.47□□□□□ -2.49
RNU6-238P-201ENST00000363313 BRCA1P38398 1863 aaKnown RBP-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 MBLAC1A4D2B0 266 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 F8WDY8 70 aa-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 L7N2F9 121 aa-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 SCGNO76038 276 aa-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 MAS1P04201 325 aa-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 PABPC4LP0CB38 370 aaKnown RBP-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 PPT1P50897 306 aa-0.48□□□□□ -2.49
RNU6-238P-201ENST00000363313 ECH1Q13011 328 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms