RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 OR10AC1Q8NH08 325 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CCDC32Q9BV29 185 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PBOV1Q9GZY1 135 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 HDHD2Q9H0R4 259 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ZCCHC4Q9H5U6 513 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PLEK2Q9NYT0 353 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 NUFIP1Q9UHK0 495 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PRSS50Q9UI38 385 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TIMM10BQ9Y5J6 103 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ARHGAP21Q5T5U3 1957 aa18.39■□□□□ 0.53
MAP1LC3A-201ENST00000360668 A0A1B0GVG6 124 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 A0A1W2PPK0 400 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ANKRD61A6NGH8 418 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 RGS5O15539 181 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SGCEO43556 437 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 WDR1O75083 606 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ACHEP22303 614 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CX3CR1P49238 355 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PPP3R1P63098 170 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FAPQ12884 760 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ECH1Q13011 328 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SKA3Q8IX90 412 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FREM1Q5H8C1 2179 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 APOC1P02654 83 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ZNF32P17041 273 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SRMP19623 302 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PTBP1P26599 531 aaKnown RBP eCLIP18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MPGP29372 298 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OTX1P32242 354 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MAGEB1P43366 347 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PRKXP51817 358 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CAV3P56539 151 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 METAP1DQ6UB28 335 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ZNF283Q8N7M2 679 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OR51A4Q8NGJ6 313 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ABCB9Q9NP78 766 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 HHLA2Q9UM44 414 aa18.38■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SMG1Q96Q15 3661 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ATMQ13315 3056 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SMIM30A4D0T7 59 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MBD3L4A6NDZ8 208 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MBD3L3A6NE82 208 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MBD3L5A6NJ08 208 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SYNGR3O43761 229 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 NCR1O76036 304 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TTRP02766 147 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 RAB3BP20337 219 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SOX2P48431 317 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ZNF121P58317 390 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 IFITM3Q01628 133 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OR6K3Q8NGY3 331 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MBD3L2Q8NHZ7 208 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TSEN15Q8WW01 171 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SPTSSAQ969W0 71 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TMEM106AQ96A25 262 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OR2H1Q9GZK4 316 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MIXL1Q9H2W2 232 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 BRD7Q9NPI1 651 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ADAM30Q9UKF2 790 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 DHDHQ9UQ10 334 aa18.37■□□□□ 0.53
MAP1LC3A-201ENST00000360668 LOC107986453A0A1B0GWG9 222 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FIGNL2A6NMB9 653 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PDCD5O14737 125 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 DOK2O60496 412 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 MMP7P09237 267 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TDGF1P3P51864 188 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FOXG1P55316 489 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PSG4Q00888 419 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TFAP2EQ6VUC0 442 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 DCDC5Q6ZRR9 648 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 NR2C2APQ86WQ0 139 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 GCNT2Q8N0V5 402 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CISD2Q8N5K1 135 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OR1F12Q8NHA8 337 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ASB5Q8WWX0 329 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 COX4I2Q96KJ9 171 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 BBC3Q96PG8 261 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SLITRK2Q9H156 845 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 GTF3C1Q12789 2109 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 DOCK7Q96N67 2140 aa18.36■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SPENQ96T58 3664 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 A0A0G2JK05 382 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 OR6C6A6NF89 314 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CNOT4O95628 575 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 TPOP07202 933 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 HOXD4P09016 255 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ACSM4P0C7M7 580 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 CRYGSP22914 178 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 KIR2DL2P43627 348 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 GALK2Q01415 458 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 RSPO1Q2MKA7 263 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 SLC36A2Q495M3 483 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 C9orf135Q5VTT2 229 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 ZNF774Q6NX45 483 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PRSS45Q7RTY3 260 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FGFBP3Q8TAT2 258 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 WNT5BQ9H1J7 359 aa18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 PRRC2CQ9Y520 2896 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3A-201ENST00000360668 P2RY10O00398 339 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms