RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 IKZF1Q13422 519 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 STK11Q15831 433 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 EXT1Q16394 746 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 PCK2Q16822 640 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 C1QL3Q5VWW1 255 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 C11orf40Q8WZ69 217 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 FANCFQ9NPI8 374 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 GPR173Q9NS66 373 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 LUZP4Q9P127 313 aa14.74□□□□□ -0.05
SCAF1-201ENST00000360565 GDF2Q9UK05 429 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-201ENST00000360565 SNRNP70P08621 437 aaKnown RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 FOLR1P15328 257 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 AKR1C1Q04828 323 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 ZNF169Q14929 603 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TEX261Q6UWH6 196 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 OR1L3Q8NH93 324 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 MRGPRX4Q96LA9 322 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 EDARQ9UNE0 448 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 U3KQ87 197 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 CD300LBA8K4G0 201 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 ERGP11308 486 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SNRPNP63162 240 aaKnown RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TFF2Q03403 129 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 OR4S1Q8NGB4 309 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SCN4AP35499 1836 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 APC2O95996 2303 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 MCRIP1C9JLW8 97 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 M0R135 149 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TPOP07202 933 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 RNF128Q8TEB7 428 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 ZNF799Q96GE5 643 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TSPAN32Q96QS1 320 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TINAGL1Q9GZM7 467 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 LSM2Q9Y333 95 aaKnown RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 A0A1W2PQF6 199 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 VSTM5A8MXK1 200 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 TNFSF14O43557 240 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SCO1O75880 301 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SERPINF1P36955 418 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 LIMS1P48059 325 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SMAD4Q13485 552 aaKnown RBP14.73□□□□□ -0.05
SCAF1-201ENST00000360565 ABI3BPQ7Z7G0 1075 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SPEM1Q8N4L4 309 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 SEMA6DQ8NFY4 1073 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 MARCH1Q8TCQ1 289 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 FOXJ3Q9UPW0 622 aa14.73□□□□□ -0.05
SCAF1-201ENST00000360565 IFNA1P01562 189 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 FKBP2P26885 142 aaKnown RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CDAP32320 146 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 EPHA4P54764 986 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 C17orf107Q6ZR85 190 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 KMT5CQ86Y97 462 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 NPEPL1Q8NDH3 523 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 TTC9Q92623 222 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 UTP23Q9BRU9 249 aaKnown RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 NXF2Q9GZY0 626 aaKnown RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 MOB1AQ9H8S9 216 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 MRPS18AQ9NVS2 196 aaKnown RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 ALG1L2C9J202 215 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 TOR1AO14656 332 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 TMEM127O75204 238 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CTLA4P16410 223 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CYB561P49447 251 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 FUT5Q11128 374 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 TMEM71Q6P5X7 295 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 GLDNQ6ZMI3 551 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 LSMEM1Q8N8F7 131 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CNEP1R1Q8N9A8 125 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 HSD17B11Q8NBQ5 300 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 OR4D6Q8NGJ1 314 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 PCOLCE2Q9UKZ9 415 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 RTTNQ86VV8 2226 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 ASXL3Q9C0F0 2248 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 IGHV1OR21-1A0A087WYE8 117 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 NDUFB6O95139 128 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 TSC22D1Q15714 1073 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 OXGR1Q96P68 337 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CCDC86Q9H6F5 360 aaKnown RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 CSAG2Q9Y5P2 127 aa14.72□□□□□ -0.05
SCAF1-201ENST00000360565 SIRT4Q9Y6E7 314 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-201ENST00000360565 IGHV3-15A0A0B4J1V0 119 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 SULT1C2O00338 296 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 RGS11O94810 467 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 OPRM1P35372 400 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 CRYBA2P53672 197 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 ECH1Q13011 328 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 PEA15Q15121 130 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 BHLHE23Q8NDY6 225 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 OR5L1Q8NGL2 311 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 MARC2Q969Z3 335 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 CMTM3Q96MX0 182 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 FAM212BQ9NTI7 297 aaPredicted RBP14.71□□□□□ -0.05
SCAF1-201ENST00000360565 MTFP1Q9UDX5 166 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 PHF1O43189 567 aaPredicted RBP14.71□□□□□ -0.05
SCAF1-201ENST00000360565 BAMBIQ13145 260 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 TOMM34Q15785 309 aaPredicted RBP14.71□□□□□ -0.05
SCAF1-201ENST00000360565 TAF9Q16594 264 aa14.71□□□□□ -0.05
SCAF1-201ENST00000360565 GSG1Q2KHT4 349 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms