RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 MMP25Q9NPA2 562 aa9.55□□□□□ -0.88
CAPN3-205ENST00000357568 PPP4R1LQ9P1A2 415 aa9.55□□□□□ -0.88
CAPN3-205ENST00000357568 TECTAO75443 2155 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 TCRBV21S2A2A0A5A6 115 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 PLGP00747 810 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 S1PR1P21453 382 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 UCP2P55851 309 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 HGFACQ04756 655 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 MESTQ5EB52 335 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 TMEM31Q5JXX7 168 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 SLC18B1Q6NT16 456 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 KCTD18Q6PI47 426 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 PHOSPHO1Q8TCT1 267 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 LCN9Q8WX39 176 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 FAM46BQ96A09 425 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ANKRD9Q96BM1 317 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 VSTM2LQ96N03 204 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ELOVL3Q9HB03 270 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 CUTCQ9NTM9 273 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 A0A1B0GTH9 108 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 BLACEA4D250 179 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 OR52A4PA6NMU1 304 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 FAM171A2A8MVW0 826 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 K7ESF4 209 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 LAMTOR5O43504 91 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 CSTAP01040 98 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 IGLV3-19P01714 112 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ERCC1P07992 297 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 TDGF1P13385 188 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 GABRG2P18507 467 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 RAB38P57729 211 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 CST6Q15828 149 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 VAX1Q5SQQ9 334 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 GLYATL3Q5SZD4 288 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ZNF585AQ6P3V2 769 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 RBMS3Q6XE24 437 aaKnown RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 DPY19L4Q7Z388 723 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 FJX1Q86VR8 437 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 C1orf210Q8IVY1 113 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 OR10R2Q8NGX6 335 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ZCCHC10Q8TBK6 192 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 KIRREL1Q96J84 757 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 OPA3Q9H6K4 179 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 ZDHHC4Q9NPG8 344 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 DHCR7Q9UBM7 475 aaKnown RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 FARSAQ9Y285 508 aaKnown RBP9.54□□□□□ -0.88
CAPN3-205ENST00000357568 TMED7Q9Y3B3 224 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 RHBDD3Q9Y3P4 386 aa9.54□□□□□ -0.88
CAPN3-205ENST00000357568 EEF1E1-BLOC1S5C9J1V9 151 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 AP4M1O00189 453 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 FARS2O95363 451 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 CSTBP04080 98 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 HKR1P10072 659 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RAB5CP51148 216 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RAB1AP62820 205 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 OR7A5Q15622 319 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 MDGA2Q7Z553 956 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 WDR5BQ86VZ2 330 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 CA13Q8N1Q1 262 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ARRDC1Q8N5I2 433 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RRNAD1Q96FB5 475 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ZC3H10Q96K80 434 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 MRGPRX1Q96LB2 322 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 TSPAN32Q96QS1 320 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 LMF1Q96S06 567 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 PRRX2Q99811 253 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 Q9N2J8 555 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 GDF2Q9UK05 429 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 GTF2A1LQ9UNN4 478 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 EYSQ5T1H1 3165 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 H0YIZ8 118 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RAB27BO00194 218 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 CTSVO60911 334 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ZNF217O75362 1048 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 SFT2D2O95562 160 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 BPNT1O95861 308 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ADH6P28332 368 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ID2Q02363 134 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 RHEBQ15382 184 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 AGBL4Q5VU57 503 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 TRAPPC6BQ86SZ2 158 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 ZNF775Q96BV0 537 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 TSSK2Q96PF2 358 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 MESP1Q9BRJ9 268 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 KCNK15Q9H427 330 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 SRA1Q9HD15 236 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 PDE7BQ9NP56 450 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms