RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RIDAP52758 137 aaKnown RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 ECH1Q13011 328 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 TBC1D28Q2M2D7 210 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 XAF1Q6GPH4 301 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 DEGS2Q6QHC5 323 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF101Q8IZC7 436 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 SPARTQ8N0X7 666 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 KLHL36Q8N4N3 616 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 PPP1R14AQ96A00 147 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF799Q96GE5 643 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 HS3ST6Q96QI5 342 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 OR5M11Q96RB7 305 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF696Q9H7X3 374 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 CAB39Q9Y376 341 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 N6AMT1Q9Y5N5 214 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 HRNRQ86YZ3 2850 aaPredicted RBP21.95■■□□□ 1.1
SSBP3-202ENST00000357475 SULT1C4O75897 302 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 COL8A1P27658 744 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 LOXP28300 417 aaPredicted RBP21.95■■□□□ 1.1
SSBP3-202ENST00000357475 ACTA2P62736 377 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 ACTG2P63267 376 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 NCMAPQ5T1S8 102 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 RNLSQ5VYX0 342 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 ZNF773Q6PK81 442 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 SSX8Q7RTT4 187 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 PRSS45Q7RTY3 260 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 ZNF283Q8N7M2 679 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 RORBQ92753 470 aa21.95■■□□□ 1.1
SSBP3-202ENST00000357475 MOV10Q9HCE1 1003 aaKnown RBP21.95■■□□□ 1.1
SSBP3-202ENST00000357475 CHCHD3Q9NX63 227 aaKnown RBP21.95■■□□□ 1.1
SSBP3-202ENST00000357475 LSM2Q9Y333 95 aaKnown RBP21.95■■□□□ 1.1
SSBP3-202ENST00000357475 TMEM129A0AVI4 362 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 ATP6V1G2-DDX39BF2Z307 99 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 ABCD4O14678 606 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 ZNF254O75437 659 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 NGFP01138 241 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 SLC6A9P48067 706 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 GTF2A1P52655 376 aaPredicted RBP21.94■■□□□ 1.1
SSBP3-202ENST00000357475 ZNF121P58317 390 aaPredicted RBP21.94■■□□□ 1.1
SSBP3-202ENST00000357475 TMEM108Q6UXF1 575 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 SYS1Q8N2H4 156 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 SPTSSAQ969W0 71 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 DOK1Q99704 481 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 CDH20Q9HBT6 801 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 FAM206AQ9NX38 181 aa21.94■■□□□ 1.1
SSBP3-202ENST00000357475 CASKO14936 926 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 MYL12BO14950 172 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 RPSAP08865 295 aaKnown RBP21.93■■□□□ 1.1
SSBP3-202ENST00000357475 FAM157BP0CG42 384 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PAX7P23759 505 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PEX19P40855 299 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PSMA6P60900 246 aaKnown RBP21.93■■□□□ 1.1
SSBP3-202ENST00000357475 EMX1Q04741 257 aaPredicted RBP21.93■■□□□ 1.1
SSBP3-202ENST00000357475 SNAI3Q3KNW1 292 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 KLBQ86Z14 1044 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PIAS4Q8N2W9 510 aaPredicted RBP21.93■■□□□ 1.1
SSBP3-202ENST00000357475 OR52N1Q8NH53 320 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 FAM222BQ8WU58 562 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PIK3IP1Q96FE7 263 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 C4orf45Q96LM5 186 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 POFUT1Q9H488 388 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 NGBQ9NPG2 151 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 ZNF319Q9P2F9 582 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 ERGIC3Q9Y282 383 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 DCHS2Q6V1P9 2916 aa21.93■■□□□ 1.1
SSBP3-202ENST00000357475 PLAUP00749 431 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 LCKP06239 509 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 SMIM18P0DKX4 95 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 PCMT1P22061 227 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 PTAFRP25105 342 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 TPTEP56180 551 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 NANOS3P60323 173 aaKnown RBP21.92■■□□□ 1.1
SSBP3-202ENST00000357475 SP5Q6BEB4 398 aaPredicted RBP21.92■■□□□ 1.1
SSBP3-202ENST00000357475 ADAM5Q6NVV9 412 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 RFPL4BQ6ZWI9 263 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 FAM220AQ7Z4H9 259 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 TSPAN14Q8NG11 270 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 PSMG3-AS1Q96PY0 264 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 MND1Q9BWT6 205 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 ACOT13Q9NPJ3 140 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 PKDREJQ9NTG1 2253 aa21.92■■□□□ 1.1
SSBP3-202ENST00000357475 TMEM269A0A1B0GVZ9 245 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 MT-ND5P03915 603 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 ANXA2P07355 339 aaKnown RBP21.91■■□□□ 1.1
SSBP3-202ENST00000357475 WNT4P56705 351 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 ERVS71-1P61550 626 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 BEX5Q5H9J7 111 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 DRAM2Q6UX65 266 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 TMPRSS11AQ6ZMR5 421 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 FAM57BQ71RH2 274 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 PRSS35Q8N3Z0 413 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 ZFP41Q8N8Y5 198 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 OR1J2Q8NGS2 313 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 NEUROG1Q92886 237 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 SPOCK3Q9BQ16 436 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 ESRP2Q9H6T0 727 aaKnown RBP21.91■■□□□ 1.1
SSBP3-202ENST00000357475 SIRT4Q9Y6E7 314 aaPredicted RBP21.91■■□□□ 1.1
SSBP3-202ENST00000357475 R4GMQ9 66 aa21.91■■□□□ 1.1
SSBP3-202ENST00000357475 SMPD2O60906 423 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 CRYAAP02489 173 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms