RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RAP1AP62834 184 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 IKZF1Q13422 519 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM182Q6ZP80 229 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF561Q8N587 486 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 BCORP1Q8N888 145 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 FGGYQ96C11 551 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 DUX1O43812 170 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 LRP3O75074 770 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 SPP1P10451 314 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 TLE3Q04726 772 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 ZIC1Q15915 447 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 EEF1A1P5Q5VTE0 462 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 DGAT2L6Q6ZPD8 337 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF681Q96N22 645 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 OBP2AQ9NY56 170 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 SLC22A13Q9Y226 551 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 DBHP09172 617 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 FABP4P15090 132 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 BLVRBP30043 206 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 TSFMP43897 325 aaKnown RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 NR0B2Q15466 257 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 PRAMEF20Q5VT98 475 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 C1orf53Q5VUE5 145 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 WBP2NLQ6ICG8 309 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 OR52W1Q6IF63 320 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 MCEMP1Q8IX19 187 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 MARCH1Q8TCQ1 289 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 FBLIM1Q8WUP2 373 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 SORCS2Q96PQ0 1159 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 FGF21Q9NSA1 209 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 KPTNQ9Y664 436 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 XRCC2O43543 280 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 PNMTP11086 282 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 PTAFRP25105 342 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 WDR88Q6ZMY6 472 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 MDGA2Q7Z553 956 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 OR2L13Q8N349 312 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 RBM24Q9BX46 236 aaKnown RBP12.74□□□□□ -0.37
SREBF1-202ENST00000355815 DTX4Q9Y2E6 619 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
SREBF1-202ENST00000355815 YKT6O15498 198 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 TRAPPC6AO75865 159 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 HAAOP46952 286 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 RNF4P78317 190 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 PRAMEF8Q5VWM4 474 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 PRAMEF7Q5VXH5 474 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 BVESQ8NE79 360 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 OR5M8Q8NGP6 311 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 DEFB126Q9BYW3 111 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 AICDAQ9GZX7 198 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 HSPB6O14558 160 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 CYB5BO43169 146 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 BRINP1O60477 761 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 CRYBA1P05813 215 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 SERPINE2P07093 398 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 CALCBP10092 127 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 GLDNQ6ZMI3 551 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-202ENST00000355815 EXOSC3Q9NQT5 275 aaKnown RBP12.73□□□□□ -0.37
SREBF1-202ENST00000355815 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 SEC14L5O43304 696 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 SUSD5O60279 629 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 F10P00742 488 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 THBS1P07996 1170 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 CD14P08571 375 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 TBXA2RP21731 343 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 PMPCAQ10713 525 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 PLXDC1Q8IUK5 500 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 HSD17B8Q92506 261 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
SREBF1-202ENST00000355815 hCG_1809904A0A1W2PP81 198 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 A0A1W2PQF6 199 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 A0A1W2PR64 198 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 A0A1W2PRV1 198 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 BET1O15155 118 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ASCL1P50553 236 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF273Q14593 569 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM244Q5VVB8 128 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 OR2T2Q6IF00 324 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF595Q8IYB9 648 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 OR11H4Q8NGC9 324 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 EFEMP2O95967 443 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms