RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GALR3O60755 368 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CRLF1O75462 422 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DUSP14O95147 198 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FARS2O95363 451 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 HOXC4P09017 264 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CNR1P21554 472 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GDF1P27539 372 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SHC1P29353 583 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TRAM2Q15035 370 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 XKR4Q5GH76 650 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PAGE3Q5JUK9 113 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 AP1ARQ63HQ0 302 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 RUSC1-AS1Q66K80 236 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CGB2Q6NT52 195 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ULK3Q6PHR2 472 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 UNQ9370/PRO34162Q6UXP9 181 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FRA10AC1Q70Z53 315 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 C17orf82Q86X59 251 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PDIK1LQ8N165 341 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FNDC5Q8NAU1 212 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CXorf40AQ8TE69 158 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FAM151AQ8WW52 585 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IL1F10Q8WWZ1 152 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 OR8D1Q8WZ84 308 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IL22RA2Q969J5 263 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 MRGPRFQ96AM1 343 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 RPEQ96AT9 228 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 RBMXL1Q96E39 390 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PORCNQ9H237 461 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 RPF2Q9H7B2 306 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FBXO8Q9NRD0 319 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 KCNIP1Q9NZI2 227 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 UXTQ9UBK9 157 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CNOT1A5YKK6 2376 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV3OR16-10A0A075B7F0 116 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC160A6NGH7 325 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SLC22A20A6NK97 555 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TRAF3IP2O43734 574 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SCN2BO60939 215 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ICOSLGO75144 302 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ETHE1O95571 254 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DCNP07585 359 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 MDH2P40926 338 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 UBE2E1P51965 193 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 MLF1P58340 268 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 UBE2G2P60604 165 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PMS2P3Q13401 168 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PTPN20Q4JDL3 420 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TFAP2EQ6VUC0 442 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ITPRIPQ8IWB1 547 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SKA3Q8IX90 412 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 C10orf67Q8IYJ2 551 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 KRT222Q8N1A0 295 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ZADH2Q8N4Q0 377 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 WDR31Q8NA23 367 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 NOXO1Q8NFA2 376 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DCUN1D4Q92564 292 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 UBE2E2Q96LR5 201 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CSPG4P5Q96PW8 444 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ZC4H2Q9NQZ6 224 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PLSCR3Q9NRY6 295 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 EURLQ9NYK6 297 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CALYQ9NYX4 217 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SLC25A37Q9NYZ2 338 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CLCF1Q9UBD9 225 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SLC22A14Q9Y267 594 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 F11RQ9Y624 299 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 NLRP1Q9C000 1473 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ADGRA3Q8IWK6 1321 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DHRS7CA6NNS2 312 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SMKR1H3BMG3 65 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CDC7O00311 574 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF354AO60765 605 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FKBP6O75344 327 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PSIP1O75475 530 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 LSM8O95777 96 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 HPGDP15428 266 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IL12BP29460 328 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CEACAM3P40198 252 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 YAP1P46937 504 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CACNG7P62955 275 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PSMD5Q16401 504 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TFDP3Q5H9I0 405 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GCSAMLQ5JQS6 135 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CMC1Q7Z7K0 106 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CDKL3Q8IVW4 592 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 OR10AD1Q8NGE0 317 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ITFG1Q8TB96 612 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 RNF170Q96K19 258 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SCGB3A2Q96PL1 93 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ALS2CR12Q96Q35 445 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 PARD6GQ9BYG4 376 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SRMSQ9H3Y6 488 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 WFDC1Q9HC57 220 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CTPS2Q9NRF8 586 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 EIF2AK4Q9P2K8 1649 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ABCC1P33527 1531 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PDZD2O15018 2839 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 DCCP43146 1447 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms