RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SLC22A24Q8N4F4 322 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 OR2AJ1Q8NGZ0 328 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 OTOSQ8NHW6 89 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 AMELYQ99218 206 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 CACNG6Q9BXT2 260 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 ASH2LQ9UBL3 628 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 ERGIC3Q9Y282 383 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 LHFPL6Q9Y693 200 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 TRIM64BA6NI03 449 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MRPS14O60783 128 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 TMCC2O75069 709 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 FARS2O95363 451 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 CLPTM1O96005 669 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 LCKP06239 509 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 PATE4P0C8F1 98 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 LIMS3P0CW19 117 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 LIMS4P0CW20 117 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 CBR1P16152 277 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 CALCRP30988 508 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 ARR3P36575 388 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 EMX1Q04741 257 aaPredicted RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 GALEQ14376 348 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 IRF3Q14653 427 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MED22Q15528 200 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 KCNMB1Q16558 191 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 TP53I3Q53FA7 332 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 C1QTNF12Q5T7M4 302 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 SLC18B1Q6NT16 456 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 SLC16A14Q7RTX9 510 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 KLHL36Q8N4N3 616 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 SNX33Q8WV41 574 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 IGFBPL1Q8WX77 278 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MND1Q9BWT6 205 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 CDCA4Q9BXL8 241 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 RNF121Q9H920 327 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 SIAEQ9HAT2 523 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 VCX3AQ9NNX9 186 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 CBLN4Q9NTU7 201 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 GDF2Q9UK05 429 aaPredicted RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 IKZF2Q9UKS7 526 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 TMEM14AQ9Y6G1 99 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 PRR32B1ATL7 298 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 H7C1Q1 480 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 J3QLW9 94 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 NDUFS7O75251 213 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 UBL3O95164 117 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 CD8AP01732 235 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 OR8G3PP0DMU2 310 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ZNF19P17023 458 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ALOX5APP20292 161 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 PCMT1P22061 227 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 PAX7P23759 505 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 LSM6P62312 80 aaKnown RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 TBCEQ15813 527 aaPredicted RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 ZNF544Q6NX49 715 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ZNF322Q6U7Q0 402 aaPredicted RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 DTX2Q86UW9 622 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 SKA3Q8IX90 412 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 CCDC36Q8IYA8 594 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 FGFBP3Q8TAT2 258 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 SPRYD4Q8WW59 207 aaPredicted RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 GATAD2BQ8WXI9 593 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 C4orf36Q96KX1 117 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ABHD6Q9BV23 337 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 JAM3Q9BX67 310 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 KCNN2Q9H2S1 579 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 CENPMQ9NSP4 180 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
TPM4-202ENST00000344824 CYB5R1Q9UHQ9 305 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 GNG8Q9UK08 70 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
TPM4-202ENST00000344824 CHD3Q12873 2000 aaKnown RBP11.92□□□□□ -0.5
TPM4-202ENST00000344824 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 IGHV2OR16-5A0A0B4J2B6 119 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 PHYHO14832 338 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 RER1O15258 196 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 CST2P09228 141 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 PSMB9P28065 219 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 APOBEC3AP31941 199 aaPredicted RBP11.92□□□□□ -0.5
TPM4-202ENST00000344824 OR12D2P58182 307 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 RAB1AP62820 205 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 SNTB2Q13425 540 aaKnown RBP11.92□□□□□ -0.5
TPM4-202ENST00000344824 AQP6Q13520 282 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 RAB39AQ14964 217 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 FAM27BQ5VT28 67 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms