RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MED12LQ86YW9 2145 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 F5H5K5 113 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 TFECO14948 347 aaPredicted RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 NR2C1P13056 603 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 IGFBP3P17936 291 aaPredicted RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 CX3CR1P49238 355 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 ZNF84P51523 738 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 HGFACQ04756 655 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 TAF13Q15543 124 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 FAM57BQ71RH2 274 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 SERPINA12Q8IW75 414 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 UBE2J2Q8N2K1 259 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 ZNF671Q8TAW3 534 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 TMEM45BQ96B21 275 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 FGGYQ96C11 551 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 PRRG4Q9BZD6 226 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 NUFIP1Q9UHK0 495 aaKnown RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 SPATA2Q9UM82 520 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 CAMK2AQ9UQM7 478 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 SLC19A2O60779 497 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 SYNGR4O95473 234 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 TMIGD3P0DMS9 266 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 CPN1P15169 458 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF32P17041 273 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ACHEP22303 614 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 GUCA1AP43080 201 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF774Q6NX45 483 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 SKA3Q8IX90 412 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 CMTM4Q8IZR5 234 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 Q8N402 240 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF283Q8N7M2 679 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 PLEK2Q9NYT0 353 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ABRACLQ9P1F3 81 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 TRAV17A0A0B4J275 112 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ISPDA4D126 451 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF503-AS2A6NEH8 195 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 PDCD5O14737 125 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 PLA2G10O15496 165 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ABOP16442 354 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 RFX2P48378 723 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 SPOCK1Q08629 439 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 GFOD2Q3B7J2 385 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 MTFR2Q6P444 385 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF704Q6ZNC4 412 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 OR1J2Q8NGS2 313 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 AKR7LQ8NHP1 331 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 GCDHQ92947 438 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 LYZL4Q96KX0 146 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 SLCO5A1Q9H2Y9 848 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF275Q9NSD4 429 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 FAIMQ9NVQ4 179 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 ZNF224Q9NZL3 707 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
CDC42-202ENST00000344548 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
CDC42-202ENST00000344548 PIEZO2Q9H5I5 2752 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 ANXA2P2A6NMY6 339 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 ANXA2P07355 339 aaKnown RBP11.89□□□□□ -0.51
CDC42-202ENST00000344548 CTSSP25774 331 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 OTX1P32242 354 aaPredicted RBP11.89□□□□□ -0.51
CDC42-202ENST00000344548 PRSS12P56730 875 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 TMEM244Q5VVB8 128 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 GDPD1Q8N9F7 314 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 KCNJ15Q99712 375 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 SLITRK2Q9H156 845 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 GPR84Q9NQS5 396 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 A0A096LPE4 126 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 A0A1W2PPZ6 126 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 SYT7O43581 403 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 IGHG3P01860 377 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 YES1P07947 543 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 UBCP0CG48 685 aaKnown RBP11.89□□□□□ -0.51
CDC42-202ENST00000344548 PTHLHP12272 177 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 EFNB2P52799 333 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 PSG4Q00888 419 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 SNAI3Q3KNW1 292 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
CDC42-202ENST00000344548 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 LYPD6Q86Y78 171 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 OR51D1Q8NGF3 324 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 PRSS50Q9UI38 385 aa11.89□□□□□ -0.51
CDC42-202ENST00000344548 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
CDC42-202ENST00000344548 MAP1BP46821 2468 aaKnown RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 SYNGR3O43761 229 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 APOA1P02647 267 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 EIF2S3P41091 472 aaKnown RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 ARF1P84077 181 aaKnown RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 RIN1Q13671 783 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms