RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PTTG3PQ9NZH4 202 aa13.66□□□□□ -0.22
ATG4B-201ENST00000344376 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
ATG4B-201ENST00000344376 F5H5K5 113 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 SURF4O15260 269 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 SRD5A1P18405 259 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 TNFRSF1AP19438 455 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 FMO3P31513 532 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 SLC25A1P53007 311 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 MVKQ03426 396 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 DBPQ10586 325 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-201ENST00000344376 CDK5R2Q13319 367 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 CRMP1Q14194 572 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 FBXW12Q6X9E4 464 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 PEG10Q86TG7 708 aaKnown RBP13.65□□□□□ -0.22
ATG4B-201ENST00000344376 GLCCI1Q86VQ1 547 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 OR2Z1Q8NG97 314 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 OR9Q1Q8NGQ5 310 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 OR4Q3Q8NH05 313 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 DDOQ99489 341 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 NIPSNAP1Q9BPW8 284 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 ZNF556Q9HAH1 456 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
ATG4B-201ENST00000344376 TREM2Q9NZC2 230 aa13.65□□□□□ -0.22
ATG4B-201ENST00000344376 BLVRAP53004 296 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-201ENST00000344376 TPTEP56180 551 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 MALLQ13021 153 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 CR1LQ2VPA4 569 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 OR51L1Q8NGJ5 315 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 SPTSSAQ969W0 71 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 RAB39BQ96DA2 213 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 RBM4Q9BWF3 364 aaKnown RBP13.64□□□□□ -0.23
ATG4B-201ENST00000344376 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-201ENST00000344376 POMPQ9Y244 141 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 CACNG2Q9Y698 323 aa13.64□□□□□ -0.23
ATG4B-201ENST00000344376 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 ANPEPP15144 967 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 SELEP16581 610 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 HLXQ14774 488 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 SLC27A4Q6P1M0 643 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 OR6K6Q8NGW6 343 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 OR51F2Q8NH61 342 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 UTP4Q969X6 686 aaKnown RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF582Q96NG8 517 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 C1QTNF5Q9BXJ0 243 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 MMADHCQ9H3L0 296 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-201ENST00000344376 CMC2Q9NRP2 79 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 COMMD3-BMI1R4GMX3 469 aa13.63□□□□□ -0.23
ATG4B-201ENST00000344376 TCRBV3S1A0A5B6 114 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ISPDA4D126 451 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 WNT9BO14905 357 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 FKBP6O75344 327 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 LCATP04180 440 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 SPARCP09486 303 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ACSM4P0C7M7 580 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 SPI1P17947 270 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 PAICSP22234 425 aaKnown RBP13.62□□□□□ -0.23
ATG4B-201ENST00000344376 GRK5P34947 590 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ENTPD1P49961 510 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 OR2T2Q6IF00 324 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 IL17RELQ6ZVW7 336 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ATG16L2Q8NAA4 619 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 NMNAT2Q9BZQ4 307 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF665Q9H7R5 613 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 PNRC2Q9NPJ4 139 aaKnown RBP13.62□□□□□ -0.23
ATG4B-201ENST00000344376 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 IL19Q9UHD0 177 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 TMEFF2Q9UIK5 374 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-201ENST00000344376 M0R135 149 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 GSC2O15499 205 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 GYPBP06028 91 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 MSMBP08118 114 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 POU1F1P28069 291 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 SLC6A9P48067 706 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ERFP50548 548 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 LMO4P61968 165 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 TAF13Q15543 124 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 SNCBQ16143 134 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 Q6ZR03 302 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 COLCA1Q6ZS62 124 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 IQCF1Q8N6M8 205 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 OR8G5Q8NG78 346 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 OR13G1Q8NGZ3 307 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 TMEM186Q96B77 213 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 OTULINQ96BN8 352 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 ZNF799Q96GE5 643 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 MAP6Q96JE9 813 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 GAL3ST1Q99999 423 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 COPS4Q9BT78 406 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 TEX12Q9BXU0 123 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 WDR76Q9H967 626 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 LPAR2Q9HBW0 351 aa13.62□□□□□ -0.23
ATG4B-201ENST00000344376 DDX28Q9NUL7 540 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms