RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SLC5A6Q9Y289 635 aa17.6■□□□□ 0.41
RTN1-202ENST00000342503 IGKV3D-15A0A087WSY6 115 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 A0A1B0GVI7 797 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 SLC17A2O00624 439 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 LYRM1O43325 122 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 ITGA5P08648 1049 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 ANOS1P23352 680 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 CTSSP25774 331 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 MMP15P51511 669 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 ART1P52961 327 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 PLA2G7Q13093 441 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 RTP5Q14D33 572 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 RAB11BQ15907 218 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 RNASE12Q5GAN4 147 aaKnown RBP17.59■□□□□ 0.41
RTN1-202ENST00000342503 GLT8D1Q68CQ7 371 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 MZT2BQ6NZ67 158 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 FAM57BQ71RH2 274 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 OR51A2Q8NGJ7 313 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 OR1J2Q8NGS2 313 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 MMP28Q9H239 520 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 TMEM38BQ9NVV0 291 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 ZNF319Q9P2F9 582 aa17.59■□□□□ 0.41
RTN1-202ENST00000342503 ACOT7O00154 380 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 KIR2DL3P43628 341 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 SCAND1P57086 179 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 DGCR2P98153 550 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 SPOCK1Q08629 439 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 C3AR1Q16581 482 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 RNFT1Q5M7Z0 435 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 ELFN2Q5R3F8 820 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 FAM166AQ6J272 317 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 PRSS45Q7RTY3 260 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 OR51D1Q8NGF3 324 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 RAB40AQ8WXH6 277 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 S100A16Q96FQ6 103 aaKnown RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 NKX3-1Q99801 234 aaPredicted RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 GPR35Q9HC97 309 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 RABL2AQ9UBK7 228 aaPredicted RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 CDV3Q9UKY7 258 aaKnown RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 MCTS1Q9ULC4 181 aaKnown RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 RABL2BQ9UNT1 228 aa17.58■□□□□ 0.41
RTN1-202ENST00000342503 NOSIPQ9Y314 301 aaKnown RBP17.58■□□□□ 0.41
RTN1-202ENST00000342503 DMXL1Q9Y485 3027 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 CTDSPLO15194 276 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 ACTL6AO96019 429 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 CST2P09228 141 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 CD37P11049 281 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 CEACAM16Q2WEN9 425 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 DEFB109BQ30KR1 87 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 ENKURQ8TC29 256 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 YIPF5Q969M3 257 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 HAVCR1Q96D42 359 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 ADAT3Q96EY9 351 aaPredicted RBP17.58■□□□□ 0.4
RTN1-202ENST00000342503 SOX7Q9BT81 388 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 LDAHQ9H6V9 325 aa17.58■□□□□ 0.4
RTN1-202ENST00000342503 RBFOX1Q9NWB1 397 aaKnown RBP17.58■□□□□ 0.4
RTN1-202ENST00000342503 PAQR5Q9NXK6 330 aaPredicted RBP17.58■□□□□ 0.4
RTN1-202ENST00000342503 MEGF11A6BM72 1044 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 ZNF891A8MT65 544 aaPredicted RBP17.57■□□□□ 0.4
RTN1-202ENST00000342503 BOLA2-SMG1P6H3BVE0 249 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 GSTZ1O43708 216 aaPredicted RBP17.57■□□□□ 0.4
RTN1-202ENST00000342503 CD3GP09693 182 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 CARTPTQ16568 116 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 RIPPLY2Q5TAB7 128 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 HACD4Q5VWC8 232 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 NAA40Q86UY6 237 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 SLC25A28Q96A46 364 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 PRRG4Q9BZD6 226 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 EXO5Q9H790 373 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 GPR84Q9NQS5 396 aa17.57■□□□□ 0.4
RTN1-202ENST00000342503 CGGBP1Q9UFW8 167 aaPredicted RBP17.57■□□□□ 0.4
RTN1-202ENST00000342503 DCDC2BA2VCK2 349 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 F5H5K5 113 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 MRPL33O75394 65 aaKnown RBP17.56■□□□□ 0.4
RTN1-202ENST00000342503 TMIGD3P0DMS9 266 aaPredicted RBP17.56■□□□□ 0.4
RTN1-202ENST00000342503 B4GALT1P15291 398 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 GNALP38405 381 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 POU3F4P49335 361 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 RSPO1Q2MKA7 263 aaPredicted RBP17.56■□□□□ 0.4
RTN1-202ENST00000342503 C2orf76Q3KRA6 126 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 IGFL2Q6UWQ7 119 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 ABHD12BQ7Z5M8 362 aaPredicted RBP17.56■□□□□ 0.4
RTN1-202ENST00000342503 COMMD2Q86X83 199 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 TUSC5Q8IXB3 177 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 FNDC9Q8TBE3 224 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 FAM3DQ96BQ1 224 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 ZC3HAV1LQ96H79 300 aaKnown RBP17.56■□□□□ 0.4
RTN1-202ENST00000342503 PGAM5Q96HS1 289 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 FOXB1Q99853 325 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 KCNK15Q9H427 330 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 PLEK2Q9NYT0 353 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 ZNF407Q9C0G0 2248 aa17.56■□□□□ 0.4
RTN1-202ENST00000342503 TRGV5A0A0B4J1U4 118 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 E9PLN8 166 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 CDK2P24941 298 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 DDOSTP39656 456 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SRP9P49458 86 aaKnown RBP17.55■□□□□ 0.4
RTN1-202ENST00000342503 PMP22Q01453 160 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms