RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SMIM21Q3B7S5 101 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SLC30A7Q8NEW0 376 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SPACA5Q96QH8 159 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 METAP1P53582 386 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 ELFN2Q5R3F8 820 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 NANOGP1Q8N7R0 232 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 ARPC3O15145 178 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SPRY3O43610 288 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 PSMB3P49720 205 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 CCR6P51684 374 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 ANKRD34AQ69YU3 496 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 UBE2FQ969M7 185 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 M0R296 226 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 HPNP05981 417 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 POU2F2P09086 479 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 CCR9P51686 369 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 SPATA46Q5T0L3 261 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 Q7L0L9 218 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF2Q9BSG1 426 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 PBOV1Q9GZY1 135 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 RPS27P42677 84 aaKnown RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 SLC35A2P78381 396 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 EGR3Q06889 387 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 DOC2BQ14184 412 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ACSM5Q6NUN0 579 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF321PQ8N8H1 164 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 GPR119Q8TDV5 335 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 B4GALT3O60512 393 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 UBE2G1P62253 170 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 SLC25A26Q70HW3 274 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 VASH2Q86V25 355 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 OR51S1Q8NGJ8 323 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 CNRIP1Q96F85 164 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 EPHA8P29322 1005 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 MEOX1P50221 254 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 TMEM104Q8NE00 496 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 NMES1Q9C002 83 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 POFUT1Q9H488 388 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 RANGRFQ9HD47 186 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 R4GMQ9 66 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ETHE1O95571 254 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 CT45A10P0DMU9 189 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 BMP5P22003 454 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ACKR3P25106 362 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 RPL35P42766 123 aaKnown RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ETV1P50549 477 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ELLP55199 621 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 PRSS45Q7RTY3 260 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 FOXB1Q99853 325 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 FN3KRPQ9HA64 309 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 DLL4Q9NR61 685 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 SERGEFQ9UGK8 458 aa13.59□□□□□ -0.23
UBE3B-202ENST00000342494 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-202ENST00000342494 FAM221AA4D161 298 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF705GA8MUZ8 300 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 IGFBP1P08833 259 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 RFX2P48378 723 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 TAF9Q16594 264 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 SOWAHCQ53LP3 525 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 DTWD2Q8NBA8 298 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 FLVCR1Q9Y5Y0 555 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 CXorf51AA0A1B0GTR3 108 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 HMX2A2RU54 273 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 ST8SIA3O43173 380 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 TNFSF14O43557 240 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 NDUFB3O43676 98 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 GLI4P10075 376 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 OPCMLQ14982 345 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 LRRC10Q5BKY1 277 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 LILRA6Q6PI73 481 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 FAM26EQ8N5C1 309 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 HLA-HP01893 362 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 POU3F3P20264 500 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 SIGLEC11Q96RL6 698 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 SCPEP1Q9HB40 452 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 IGHV1OR15-9A0A0B4J2B8 117 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 PPM1DO15297 605 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 DUSP1P28562 367 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 OPRM1P35372 400 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 RELAQ04206 551 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms