RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FAM122BQ7Z309 247 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 PHOSPHO2Q8TCD6 241 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 SGCZQ96LD1 299 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 PIGMQ9H3S5 423 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 PRMT8Q9NR22 394 aaPredicted RBP11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 CHRNA9Q9UGM1 479 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC5A6Q9Y289 635 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 PCDHGA9Q9Y5G4 932 aaKnown RBP11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 GPR179Q6PRD1 2367 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 POLEQ07864 2286 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 PIN1P1O15428 100 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZP3P21754 424 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 PPICP45877 212 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF84P51523 738 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RAG2P55895 527 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 Q6ZS52 159 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OR2W3Q7Z3T1 314 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 FAM213BQ8TBF2 198 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 PSME4Q14997 1843 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 NME2P1O60361 137 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ADAP1O75689 374 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 MGMTP16455 207 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 DLX2Q07687 328 aaPredicted RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ANKRD16Q6P6B7 361 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OGFOD3Q6PK18 319 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 KCNG3Q8TAE7 436 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 C10orf90Q96M02 699 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF578Q96N58 590 aaPredicted RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 C12orf57Q99622 126 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 GPR84Q9NQS5 396 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 TP53I11O14683 189 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 BET1O15155 118 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 IL5P05113 134 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OR13C7P0DN81 318 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 VSIG10L2P0DP72 767 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CNR1P21554 472 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CPT2P23786 658 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CSNK1A1P48729 337 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RPS15P62841 145 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 PAN3Q58A45 887 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RAB11FIP2Q7L804 512 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 BAP18Q8IXM2 172 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OR52N5Q8NH56 324 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ANKRD9Q96BM1 317 aaPredicted RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC7A11Q9UPY5 501 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 KIF26BQ2KJY2 2108 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ROS1P08922 2347 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 C9J4A7 227 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF205O95201 554 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 DIRAS3O95661 229 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RPA2P15927 270 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CD96P40200 585 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ACAA2P42765 397 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF117Q03924 483 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 PDSS1Q5T2R2 415 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 H1FNTQ75WM6 255 aaPredicted RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 OR5L2Q8NGL0 311 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 PIGCQ92535 297 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 CMSS1Q9BQ75 279 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 NXT1Q9UKK6 140 aaKnown RBP11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RARRES3Q9UL19 164 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 FBXO7Q9Y3I1 522 aa11.2□□□□□ -0.62
SNRNP48-201ENST00000342415 RFPL4AA6NLU0 287 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 RFPL4AL1F8VTS6 287 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 OR2F2O95006 317 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 IGHV3-9P01782 118 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 GABREP78334 506 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 HSF1Q00613 529 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 OR2F1Q13607 317 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 KIAA0895LQ68EN5 471 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 LANCL3Q6ZV70 420 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 OR1M1Q8NGA1 313 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNRF4Q8WWF5 429 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 AMELYQ99218 206 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 CYR61O00622 381 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 TNFRSF10CO14798 259 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 XRCC2O43543 280 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 PTP4A3O75365 173 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 IL33O95760 270 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 PDCD1Q15116 288 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF674Q2M3X9 581 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 MESTQ5EB52 335 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 GRINAQ7Z429 371 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 UBL7Q96S82 380 aaPredicted RBP11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 TAF9BQ9HBM6 251 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 KCNS2Q9ULS6 477 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms