RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 STK19P49842 368 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 RAB11AP62491 216 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 AMZ2Q86W34 360 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 C2orf69Q8N8R5 385 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR2T27Q8NH04 317 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR13C6PQ8NH95 151 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SPRYD4Q8WW59 207 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CLSTN3Q9BQT9 956 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 PLSCR5A0PG75 271 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LEFTY2O00292 366 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ARPC5O15511 151 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 EIF1BO60739 113 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 GP1BAP07359 652 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ADORA3P0DMS8 318 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 EIF1P41567 113 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LPAL2Q16609 132 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 HIST2H2AA3Q6FI13 130 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CPT1CQ8TCG5 803 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CHRNA9Q9UGM1 479 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 HMX2A2RU54 273 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SHISA8B8ZZ34 492 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CCKBRP32239 447 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 PPP2CAP67775 309 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 IFITM2Q01629 132 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 C16orf47Q6ZP98 133 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR5AS1Q8N127 324 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ENKD1Q9H0I2 346 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TXNL4BQ9NX01 149 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 GVINP1Q7Z2Y8 2422 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TRAV1-1A0A0B4J248 108 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TSPAN2O60636 221 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 KAT7O95251 611 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 PVRP15151 417 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CDK5Q00535 292 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CDKN3Q16667 212 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 C1orf220Q5T0J3 134 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TSEN54Q7Z6J9 526 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 DBF4BQ8NFT6 615 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR6K6Q8NGW6 343 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR5R1Q8NH85 324 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 KLHL9Q9P2J3 617 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 IGHV3-21A0A0B4J1V1 117 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 HBE1P02100 147 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR4A47Q6IF82 309 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 Q6ZTK2 550 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OVCH1Q7RTY7 1134 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF808Q8N4W9 903 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR4A4PQ8NGN8 299 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TOE1Q96GM8 510 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 RNF122Q9H9V4 155 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 NPDC1Q9NQX5 325 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 HEPACAM2A8MVW5 462 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR1E1P30953 314 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 C2orf88Q9BSF0 95 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ENPP4Q9Y6X5 453 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SULT2B1O00204 365 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 GPX5O75715 221 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 PPT1P50897 306 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 DCDP81605 110 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CNTNAP3Q9BZ76 1288 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TRBV4-1A0A0J9YWV2 114 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 FAM24AA6NFZ4 105 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 YJEFN3A6XGL0 299 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CD8AP01732 235 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 MTNR1AP48039 350 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SNTB1Q13884 538 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ATOH7Q8N100 152 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 DBHP09172 617 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SLC30A7Q8NEW0 376 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF461Q8TAF7 563 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 PSMF1Q92530 271 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LINC00052Q96N35 136 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LPAR5Q9H1C0 372 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TRIOBPQ9H2D6 2365 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 FXYD1O00168 92 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 MFNGO00587 321 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ARPC1BO15143 372 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ATP5A1P25705 553 aaKnown RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SLC6A12P48065 614 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TAS2R19P59542 299 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TSSK4Q6SA08 328 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 GALNT16Q8N428 558 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 FTMTQ8N4E7 242 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SIGLECL1Q8N7X8 197 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 FAM151AQ8WW52 585 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 MIB2Q96AX9 1013 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SFRP2Q96HF1 295 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LRFN3Q9BTN0 628 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 RABAC1Q9UI14 185 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 FGF2P09038 288 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 CD82P27701 267 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ENPP2Q13822 863 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ATP6V1FQ16864 119 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 KLHDC8AQ8IYD2 350 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 BOD1L2Q8IYS8 172 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 METTL21AQ8WXB1 218 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ACTR3CQ9C0K3 210 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 IL36AQ9UHA7 158 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 B3GALT2O43825 422 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms