RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 MMP28Q9H239 520 aa6.86□□□□□ -1.31
HIPK1-201ENST00000340480 APMAPQ9HDC9 416 aa6.86□□□□□ -1.31
HIPK1-201ENST00000340480 EPXP11678 715 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 DEFA4P12838 97 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ELK1P19419 428 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 CD79BP40259 229 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 P2RY14Q15391 338 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 C6orf183Q5T699 404 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ADPRHL1Q8NDY3 354 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 OR52H1Q8NGJ2 320 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 UHRF2Q96PU4 802 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SIGLEC11Q96RL6 698 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 LMF1Q96S06 567 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NICN1Q9BSH3 213 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 OR11A1Q9GZK7 315 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 EIF5A2Q9GZV4 153 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 RNF167Q9H6Y7 350 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 KCNIP2Q9NS61 270 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TCRBP04435 133 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ECI1P42126 302 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TAS2R30P59541 319 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SFRP4Q6FHJ7 346 aaPredicted RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 GDPD3Q7L5L3 318 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TSEN54Q7Z6J9 526 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 DNAJA3Q96EY1 480 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 C4orf45Q96LM5 186 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 EMC7Q9NPA0 242 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SERTAD4Q9NUC0 356 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 GNG13Q9P2W3 67 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SSUH2Q9Y2M2 353 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 C17orf112F2Z3M2 114 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 F5H0A9 414 aaPredicted RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 APOA2P02652 100 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 HNF1AP20823 631 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SEC61A1P61619 476 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SLC10A1Q14973 349 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 LPCAT3Q6P1A2 487 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NOXO1Q8NFA2 376 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 LIPHQ8WWY8 451 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TMEM59Q9BXS4 323 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NOX3Q9HBY0 568 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SPAG17Q6Q759 2223 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SPINT2O43291 252 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 KLF4O43474 513 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 FGF5P12034 268 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TGM1P22735 817 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 GIFP27352 417 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SOX18P35713 384 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 HOXA1P49639 335 aaPredicted RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 CD226Q15762 336 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TMEM211Q6ICI0 200 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 DTWD2Q8NBA8 298 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 DMBX1Q8NFW5 382 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 OR13C9Q8NGT0 318 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 OR2T35Q8NGX2 323 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 FLVCR1-AS1Q8TAF5 88 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SLC25A31Q9H0C2 315 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 DUSP13Q9UII6 198 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NPIPB13A6NJU9 1138 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NPIPB4C9JG80 1138 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SMAD9O15198 467 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NCR1O76036 304 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 CNIH1O95406 144 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 MMP15P51511 669 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 PLA2G7Q13093 441 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SSPNQ14714 243 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 LAIR2Q6ISS4 152 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 PWWP2BQ6NUJ5 590 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 EXD3Q8N9H8 876 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 PIGCQ92535 297 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ZNF649Q9BS31 505 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ABHD6Q9BV23 337 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 GPR87Q9BY21 358 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 LRFN1Q9P244 771 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SLC17A2O00624 439 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 ARPC1BO15143 372 aaKnown RBP6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SPOCK1Q08629 439 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 STAC2Q6ZMT1 411 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 NAA40Q86UY6 237 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 SLC22A11Q9NSA0 550 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 TRAPPC2LQ9UL33 140 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 CHST2Q9Y4C5 530 aa6.85□□□□□ -1.31
HIPK1-201ENST00000340480 OR6C68A6NDL8 312 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 NPIPB9F8W1W9 429 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 DHHO43323 396 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 ALOX5APP20292 161 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 SRD5A2P31213 254 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 ZXDAP98168 799 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 CD200R1LQ6Q8B3 271 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 TSSK4Q6SA08 328 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 CBLN3Q6UW01 205 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 CREB3L2Q70SY1 520 aa6.84□□□□□ -1.31
HIPK1-201ENST00000340480 TMPRSS7Q7RTY8 843 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms