RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MFSD8Q8NHS3 518 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 GPR119Q8TDV5 335 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 ASB5Q8WWX0 329 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 RBPMSQ93062 196 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 ELMOD3Q96FG2 381 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 FAHD2AQ96GK7 314 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SLC41A2Q96JW4 573 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TGM7Q96PF1 710 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 LMF1Q96S06 567 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 GINS4Q9BRT9 223 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 NUDT9Q9BW91 350 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TBL1XR1Q9BZK7 514 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TGIF2Q9GZN2 237 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 MOB1AQ9H8S9 216 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SRA1Q9HD15 236 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 SOHLH2Q9NX45 425 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 NKIRAS2Q9NYR9 191 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 KLHL13Q9P2N7 655 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 IL17BQ9UHF5 180 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 KCNG2Q9UJ96 466 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 DHDHQ9UQ10 334 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TMED7Q9Y3B3 224 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 IGLV3-12A0A075B6K2 115 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 IGHV5-51A0A0C4DH38 117 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 A0A1B0GTI1 187 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 TMEM272A0A1B0GTI8 110 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 A0A1W2PNV4 684 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 ANKUB1A6NFN9 424 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 MFSD2BA6NFX1 497 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 RFPL4AA6NLU0 287 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 RFPL4AL1F8VTS6 287 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 TOX3O15405 576 aaPredicted RBP9.62□□□□□ -0.87
RTN3-201ENST00000338850 ZNF28P17035 718 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 FBLP22087 321 aaKnown RBP9.62□□□□□ -0.87
RTN3-201ENST00000338850 HTR2CP28335 458 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 HSD11B1P28845 292 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 GRPRP30550 384 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 MMP16P51512 607 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 DBPQ10586 325 aaPredicted RBP9.62□□□□□ -0.87
RTN3-201ENST00000338850 ERV3-1Q14264 604 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 C2orf76Q3KRA6 126 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 SLC25A53Q5H9E4 307 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 ASPHD2Q6ICH7 369 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 STEAP1BQ6NZ63 245 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 TMEM205Q6UW68 189 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 RFPL4BQ6ZWI9 263 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 SERPINA12Q8IW75 414 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 ZDHHC22Q8N966 263 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 GATSQ8NAP1 163 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 OR1J4Q8NGS1 313 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 NUBPLQ8TB37 319 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 OMA1Q96E52 524 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 SFXN2Q96NB2 322 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 ADOQ96SZ5 270 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 UQCC2Q9BRT2 126 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 OR8D2Q9GZM6 311 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 DNTTIP1Q9H147 329 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 ZNF768Q9H5H4 540 aaKnown RBP9.62□□□□□ -0.87
RTN3-201ENST00000338850 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
RTN3-201ENST00000338850 CA10Q9NS85 328 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 TUBD1Q9UJT1 453 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 SRPK3Q9UPE1 567 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 RHBDD3Q9Y3P4 386 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 FER1L5A0AVI2 2057 aa9.62□□□□□ -0.87
RTN3-201ENST00000338850 IGLV3-32A0A0A0MS00 114 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 A0A0D9SG52 128 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 A0A1B0GX78 115 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 I3L521 148 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 OR6A2O95222 327 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 ONECUT2O95948 504 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 CFDP00746 253 aaPredicted RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 MAS1P04201 325 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 NMBP08949 121 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 UBBP0CG47 229 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 SLC25A4P12235 298 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 GTF2F2P13984 249 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 ABCD3P28288 659 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 MSX1P28360 303 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 APOBEC1P41238 236 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 RPS27AP62979 156 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 UBA52P62987 128 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 TAGLNQ01995 201 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 HLXQ14774 488 aaPredicted RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 ZNF239Q16600 458 aaKnown RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 OR5M10Q6IEU7 315 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 RGS7BPQ6MZT1 257 aaPredicted RBP9.61□□□□□ -0.87
RTN3-201ENST00000338850 ZNF529Q6P280 563 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 SLC51BQ86UW2 128 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 GABRG1Q8N1C3 465 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 ESX1Q8N693 406 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 OR51D1Q8NGF3 324 aa9.61□□□□□ -0.87
RTN3-201ENST00000338850 OR10AC1Q8NH08 325 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms